==25853== Memcheck, a memory error detector ==25853== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25853== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25853== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedCellProperties -malloc_debug -malloc_dump -memory_info ==25853== Parent PID: 24439 ==25853== ==25853== ==25853== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25853== Open file descriptor 12: ==25853== at 0xED9607D: pipe (pipe.c:29) ==25853== by 0x196FC07D: ??? ==25853== by 0x13C4F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25853== by 0xE9A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25853== by 0xE93CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25853== by 0xD610D38: PetscInitialize (pinit.c:924) ==25853== by 0xD4E6079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25853== by 0xD4E60C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25853== by 0x12F18B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25853== by 0x129EE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25853== by 0x12CAE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25853== by 0x12C980: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25853== by 0x12D017: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25853== by 0x128305: main (TestCellBasedCellProperties.cpp:19) ==25853== ==25853== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25853== at 0xED9AA1C: __open_nocancel (open64_nocancel.c:39) ==25853== by 0xED1EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25853== by 0xE89A822: ??? ==25853== by 0xE89A96F: ??? ==25853== by 0x13CF46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25853== by 0x13CF4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25853== by 0x13CAA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25853== by 0x13C4F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25853== by 0xE9A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25853== by 0xE93CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25853== by 0xD610D38: PetscInitialize (pinit.c:924) ==25853== by 0xD4E6079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25853== by 0xD4E60C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25853== by 0x12F18B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25853== by 0x129EE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25853== by 0x12CAE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25853== by 0x12C980: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25853== by 0x12D017: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25853== by 0x128305: main (TestCellBasedCellProperties.cpp:19) ==25853== ==25853== Open file descriptor 158: ==25853== ==25853== ==25853== Open file descriptor 155: ==25853== ==25853== ==25853== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedCellProperties_valgrind.txt ==25853== ==25853== ==25853== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25853== ==25853== ==25853== ==25853== HEAP SUMMARY: ==25853== in use at exit: 618,435 bytes in 8,240 blocks ==25853== total heap usage: 53,392 allocs, 45,152 frees, 1,339,333,948 bytes allocated ==25853== ==25853== LEAK SUMMARY: ==25853== definitely lost: 0 bytes in 0 blocks ==25853== indirectly lost: 0 bytes in 0 blocks ==25853== possibly lost: 0 bytes in 0 blocks ==25853== still reachable: 56 bytes in 3 blocks ==25853== suppressed: 618,379 bytes in 8,237 blocks ==25853== Reachable blocks (those to which a pointer was found) are not shown. ==25853== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25853== ==25853== For lists of detected and suppressed errors, rerun with: -s ==25853== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)