==41607== Memcheck, a memory error detector ==41607== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41607== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41607== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestMajorAirwaysCentreLinesCleaner -malloc_debug -malloc_dump -memory_info ==41607== Parent PID: 24439 ==41607== ==41607== ==41607== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41607== Open file descriptor 12: ==41607== at 0x823107D: pipe (pipe.c:29) ==41607== by 0x107AB07D: ??? ==41607== by 0xBFDD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41607== by 0x7B39418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41607== by 0x7AD2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41607== by 0x67A6D38: PetscInitialize (pinit.c:924) ==41607== by 0x667E079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41607== by 0x667E0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41607== by 0x11675D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41607== by 0x1121F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41607== by 0x1146F0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41607== by 0x1145EB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41607== by 0x114BFF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41607== by 0x1109F5: main (TestMajorAirwaysCentreLinesCleaner.cpp:18) ==41607== ==41607== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41607== at 0x8235A1C: __open_nocancel (open64_nocancel.c:39) ==41607== by 0x81B9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41607== by 0x7A30822: ??? ==41607== by 0x7A3096F: ??? ==41607== by 0xC0826DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41607== by 0xC082938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41607== by 0xC038922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41607== by 0xBFDD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41607== by 0x7B39418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41607== by 0x7AD2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41607== by 0x67A6D38: PetscInitialize (pinit.c:924) ==41607== by 0x667E079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41607== by 0x667E0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41607== by 0x11675D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41607== by 0x1121F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41607== by 0x1146F0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41607== by 0x1145EB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41607== by 0x114BFF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41607== by 0x1109F5: main (TestMajorAirwaysCentreLinesCleaner.cpp:18) ==41607== ==41607== Open file descriptor 158: ==41607== ==41607== ==41607== Open file descriptor 155: ==41607== ==41607== ==41607== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMajorAirwaysCentreLinesCleaner_valgrind.txt ==41607== ==41607== ==41607== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41607== ==41607== ==41607== ==41607== HEAP SUMMARY: ==41607== in use at exit: 618,403 bytes in 8,239 blocks ==41607== total heap usage: 493,350 allocs, 485,111 frees, 1,357,591,421 bytes allocated ==41607== ==41607== LEAK SUMMARY: ==41607== definitely lost: 0 bytes in 0 blocks ==41607== indirectly lost: 0 bytes in 0 blocks ==41607== possibly lost: 0 bytes in 0 blocks ==41607== still reachable: 24 bytes in 2 blocks ==41607== suppressed: 618,379 bytes in 8,237 blocks ==41607== Reachable blocks (those to which a pointer was found) are not shown. ==41607== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41607== ==41607== For lists of detected and suppressed errors, rerun with: -s ==41607== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)