==25667== Memcheck, a memory error detector ==25667== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25667== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25667== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellProliferativeTypes -malloc_debug -malloc_dump -memory_info ==25667== Parent PID: 24189 ==25667== ==25667== ==25667== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25667== Open file descriptor 12: ==25667== at 0xED9607D: pipe (pipe.c:29) ==25667== by 0x196FC07D: ??? ==25667== by 0x13C4F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25667== by 0xE9A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25667== by 0xE93CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25667== by 0xD610D38: PetscInitialize (pinit.c:924) ==25667== by 0xD4E6079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25667== by 0xD4E60C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25667== by 0x12CF1F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25667== by 0x127E29: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25667== by 0x12A848: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25667== by 0x12A6E8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25667== by 0x12AD7F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25667== by 0x126245: main (TestCellProliferativeTypes.cpp:19) ==25667== ==25667== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25667== at 0xED9AA1C: __open_nocancel (open64_nocancel.c:39) ==25667== by 0xED1EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25667== by 0xE89A822: ??? ==25667== by 0xE89A96F: ??? ==25667== by 0x13CF46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25667== by 0x13CF4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25667== by 0x13CAA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25667== by 0x13C4F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25667== by 0xE9A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25667== by 0xE93CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25667== by 0xD610D38: PetscInitialize (pinit.c:924) ==25667== by 0xD4E6079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25667== by 0xD4E60C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25667== by 0x12CF1F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25667== by 0x127E29: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25667== by 0x12A848: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25667== by 0x12A6E8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25667== by 0x12AD7F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25667== by 0x126245: main (TestCellProliferativeTypes.cpp:19) ==25667== ==25667== Open file descriptor 158: ==25667== ==25667== ==25667== Open file descriptor 155: ==25667== ==25667== ==25667== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellProliferativeTypes_valgrind.txt ==25667== ==25667== ==25667== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25667== ==25667== ==25667== ==25667== HEAP SUMMARY: ==25667== in use at exit: 618,439 bytes in 8,240 blocks ==25667== total heap usage: 53,362 allocs, 45,122 frees, 1,339,346,259 bytes allocated ==25667== ==25667== LEAK SUMMARY: ==25667== definitely lost: 0 bytes in 0 blocks ==25667== indirectly lost: 0 bytes in 0 blocks ==25667== possibly lost: 0 bytes in 0 blocks ==25667== still reachable: 56 bytes in 3 blocks ==25667== suppressed: 618,383 bytes in 8,237 blocks ==25667== Reachable blocks (those to which a pointer was found) are not shown. ==25667== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25667== ==25667== For lists of detected and suppressed errors, rerun with: -s ==25667== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)