==26775== Memcheck, a memory error detector ==26775== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26775== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26775== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==26775== Parent PID: 24189 ==26775== ==26775== ==26775== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26775== Open file descriptor 12: ==26775== at 0xF97307D: pipe (pipe.c:29) ==26775== by 0x196FC07D: ??? ==26775== by 0x14D0A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26775== by 0x115CF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26775== by 0x11568D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26775== by 0x1025FD38: PetscInitialize (pinit.c:924) ==26775== by 0xF14C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26775== by 0xF14C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26775== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26775== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26775== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26775== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26775== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26775== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==26775== ==26775== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26775== at 0xF977A1C: __open_nocancel (open64_nocancel.c:39) ==26775== by 0xF8FBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26775== by 0xF180822: ??? ==26775== by 0xF18096F: ??? ==26775== by 0x14DAF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26775== by 0x14DAF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26775== by 0x14D65922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26775== by 0x14D0A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26775== by 0x115CF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26775== by 0x11568D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26775== by 0x1025FD38: PetscInitialize (pinit.c:924) ==26775== by 0xF14C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26775== by 0xF14C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26775== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26775== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26775== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26775== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26775== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26775== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==26775== ==26775== Open file descriptor 158: ==26775== ==26775== ==26775== Open file descriptor 155: ==26775== ==26775== ==26775== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==26775== ==26775== ==26775== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26775== ==26775== ==26775== ==26775== HEAP SUMMARY: ==26775== in use at exit: 618,366 bytes in 8,236 blocks ==26775== total heap usage: 12,337,461 allocs, 12,329,225 frees, 3,799,161,499 bytes allocated ==26775== ==26775== LEAK SUMMARY: ==26775== definitely lost: 0 bytes in 0 blocks ==26775== indirectly lost: 0 bytes in 0 blocks ==26775== possibly lost: 0 bytes in 0 blocks ==26775== still reachable: 56 bytes in 3 blocks ==26775== suppressed: 618,310 bytes in 8,233 blocks ==26775== Reachable blocks (those to which a pointer was found) are not shown. ==26775== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26775== ==26775== For lists of detected and suppressed errors, rerun with: -s ==26775== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)