==43059== Memcheck, a memory error detector ==43059== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43059== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43059== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCodegen -malloc_debug -malloc_dump -memory_info ==43059== Parent PID: 24133 ==43059== ==43059== ==43059== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43059== Open file descriptor 12: ==43059== at 0x9E0307D: pipe (pipe.c:29) ==43059== by 0x1433207D: ??? ==43059== by 0xEE294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43059== by 0x994F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43059== by 0x98E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43059== by 0x85DFD38: PetscInitialize (pinit.c:924) ==43059== by 0x84B7079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43059== by 0x84B70C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43059== by 0x135779: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==43059== by 0x12FB0B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43059== by 0x132D44: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43059== by 0x132BE4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43059== by 0x13327B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43059== by 0x12ADA5: main (TestCodegen.cpp:19) ==43059== ==43059== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43059== at 0x9E07A1C: __open_nocancel (open64_nocancel.c:39) ==43059== by 0x9D8BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43059== by 0x80FD822: ??? ==43059== by 0x80FD96F: ??? ==43059== by 0xEED06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43059== by 0xEED0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43059== by 0xEE86922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43059== by 0xEE292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43059== by 0x994F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43059== by 0x98E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43059== by 0x85DFD38: PetscInitialize (pinit.c:924) ==43059== by 0x84B7079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43059== by 0x84B70C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43059== by 0x135779: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==43059== by 0x12FB0B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43059== by 0x132D44: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43059== by 0x132BE4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43059== by 0x13327B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43059== by 0x12ADA5: main (TestCodegen.cpp:19) ==43059== ==43059== Open file descriptor 158: ==43059== ==43059== ==43059== Open file descriptor 155: ==43059== ==43059== ==43059== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCodegen_valgrind.txt ==43059== ==43059== ==43059== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43059== ==43059== ==43059== ==43059== HEAP SUMMARY: ==43059== in use at exit: 623,691 bytes in 8,247 blocks ==43059== total heap usage: 941,059 allocs, 932,812 frees, 2,144,438,287 bytes allocated ==43059== ==43059== LEAK SUMMARY: ==43059== definitely lost: 0 bytes in 0 blocks ==43059== indirectly lost: 0 bytes in 0 blocks ==43059== possibly lost: 0 bytes in 0 blocks ==43059== still reachable: 5,367 bytes in 14 blocks ==43059== suppressed: 618,324 bytes in 8,233 blocks ==43059== Reachable blocks (those to which a pointer was found) are not shown. ==43059== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43059== ==43059== For lists of detected and suppressed errors, rerun with: -s ==43059== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 31 from 31)