==41635== Memcheck, a memory error detector ==41635== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41635== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41635== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainDistributedMesh -malloc_debug -malloc_dump -memory_info ==41635== Parent PID: 24187 ==41635== ==41635== ==41635== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41635== Open file descriptor 12: ==41635== at 0xBC1007D: pipe (pipe.c:29) ==41635== by 0x1433007D: ??? ==41635== by 0xFAE94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41635== by 0xB4FE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41635== by 0xB497D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41635== by 0xA16BD38: PetscInitialize (pinit.c:924) ==41635== by 0xA043079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41635== by 0xA0430C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41635== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41635== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41635== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41635== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41635== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41635== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==41635== ==41635== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41635== at 0xBC14A1C: __open_nocancel (open64_nocancel.c:39) ==41635== by 0xBB98BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41635== by 0xB3F5822: ??? ==41635== by 0xB3F596F: ??? ==41635== by 0xFB8E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41635== by 0xFB8E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41635== by 0xFB44922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41635== by 0xFAE92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41635== by 0xB4FE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41635== by 0xB497D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41635== by 0xA16BD38: PetscInitialize (pinit.c:924) ==41635== by 0xA043079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41635== by 0xA0430C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41635== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41635== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41635== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41635== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41635== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41635== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==41635== ==41635== Open file descriptor 158: ==41635== ==41635== ==41635== Open file descriptor 155: ==41635== ==41635== ==41635== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainDistributedMesh_valgrind.txt ==41635== ==41635== ==41635== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41635== ==41635== ==41635== ==41635== HEAP SUMMARY: ==41635== in use at exit: 618,899 bytes in 8,249 blocks ==41635== total heap usage: 428,255 allocs, 420,006 frees, 1,437,735,827 bytes allocated ==41635== ==41635== LEAK SUMMARY: ==41635== definitely lost: 0 bytes in 0 blocks ==41635== indirectly lost: 0 bytes in 0 blocks ==41635== possibly lost: 0 bytes in 0 blocks ==41635== still reachable: 24 bytes in 2 blocks ==41635== suppressed: 618,875 bytes in 8,247 blocks ==41635== Reachable blocks (those to which a pointer was found) are not shown. ==41635== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41635== ==41635== For lists of detected and suppressed errors, rerun with: -s ==41635== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 53 from 36)