==44228== Memcheck, a memory error detector ==44228== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==44228== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==44228== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==44228== Parent PID: 24187 ==44228== ==44228== ==44228== FILE DESCRIPTORS: 9 open (3 std) at exit. ==44228== Open file descriptor 12: ==44228== at 0xA7CE07D: pipe (pipe.c:29) ==44228== by 0x1433007D: ??? ==44228== by 0xFB364CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==44228== by 0xBEC7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44228== by 0xBE60D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44228== by 0xAB57D38: PetscInitialize (pinit.c:924) ==44228== by 0xA0B6079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==44228== by 0xA0B60C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==44228== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==44228== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==44228== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==44228== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==44228== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==44228== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==44228== ==44228== Open file descriptor 8: /dev/shm/open_mpi.0000 ==44228== at 0xA7D2A1C: __open_nocancel (open64_nocancel.c:39) ==44228== by 0xA756BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==44228== by 0xA0EA822: ??? ==44228== by 0xA0EA96F: ??? ==44228== by 0xFBDB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44228== by 0xFBDB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44228== by 0xFB91922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44228== by 0xFB362DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==44228== by 0xBEC7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44228== by 0xBE60D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44228== by 0xAB57D38: PetscInitialize (pinit.c:924) ==44228== by 0xA0B6079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==44228== by 0xA0B60C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==44228== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==44228== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==44228== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==44228== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==44228== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==44228== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==44228== ==44228== Open file descriptor 158: ==44228== ==44228== ==44228== Open file descriptor 155: ==44228== ==44228== ==44228== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==44228== ==44228== ==44228== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==44228== ==44228== ==44228== ==44228== HEAP SUMMARY: ==44228== in use at exit: 618,828 bytes in 8,245 blocks ==44228== total heap usage: 834,310 allocs, 826,065 frees, 1,443,362,915 bytes allocated ==44228== ==44228== LEAK SUMMARY: ==44228== definitely lost: 0 bytes in 0 blocks ==44228== indirectly lost: 0 bytes in 0 blocks ==44228== possibly lost: 0 bytes in 0 blocks ==44228== still reachable: 24 bytes in 2 blocks ==44228== suppressed: 618,804 bytes in 8,243 blocks ==44228== Reachable blocks (those to which a pointer was found) are not shown. ==44228== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==44228== ==44228== For lists of detected and suppressed errors, rerun with: -s ==44228== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 58 from 32)