==25957== Memcheck, a memory error detector ==25957== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25957== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25957== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsElement -malloc_debug -malloc_dump -memory_info ==25957== Parent PID: 24188 ==25957== ==25957== ==25957== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25957== Open file descriptor 12: ==25957== at 0xF50307D: pipe (pipe.c:29) ==25957== by 0x196FC07D: ??? ==25957== by 0x14CBD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25957== by 0x1115F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25957== by 0x110F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25957== by 0xFDEFD38: PetscInitialize (pinit.c:924) ==25957== by 0xF14C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25957== by 0xF14C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25957== by 0x11A5B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25957== by 0x115A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25957== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25957== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25957== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25957== by 0x113E95: main (TestPottsElement.cpp:19) ==25957== ==25957== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25957== at 0xF507A1C: __open_nocancel (open64_nocancel.c:39) ==25957== by 0xF48BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25957== by 0xF180822: ??? ==25957== by 0xF18096F: ??? ==25957== by 0x14D626DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25957== by 0x14D62938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25957== by 0x14D18922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25957== by 0x14CBD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25957== by 0x1115F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25957== by 0x110F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25957== by 0xFDEFD38: PetscInitialize (pinit.c:924) ==25957== by 0xF14C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25957== by 0xF14C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25957== by 0x11A5B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25957== by 0x115A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25957== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25957== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25957== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25957== by 0x113E95: main (TestPottsElement.cpp:19) ==25957== ==25957== Open file descriptor 152: ==25957== ==25957== ==25957== Open file descriptor 149: ==25957== ==25957== ==25957== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsElement_valgrind.txt ==25957== ==25957== ==25957== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25957== ==25957== ==25957== ==25957== HEAP SUMMARY: ==25957== in use at exit: 618,407 bytes in 8,239 blocks ==25957== total heap usage: 53,106 allocs, 44,867 frees, 1,339,237,822 bytes allocated ==25957== ==25957== LEAK SUMMARY: ==25957== definitely lost: 0 bytes in 0 blocks ==25957== indirectly lost: 0 bytes in 0 blocks ==25957== possibly lost: 0 bytes in 0 blocks ==25957== still reachable: 24 bytes in 2 blocks ==25957== suppressed: 618,383 bytes in 8,237 blocks ==25957== Reachable blocks (those to which a pointer was found) are not shown. ==25957== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25957== ==25957== For lists of detected and suppressed errors, rerun with: -s ==25957== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)