==25777== Memcheck, a memory error detector ==25777== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25777== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25777== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticGrowingDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25777== Parent PID: 24188 ==25777== ==25777== ==25777== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25777== Open file descriptor 12: ==25777== at 0x1109C07D: pipe (pipe.c:29) ==25777== by 0x196FC07D: ??? ==25777== by 0x14C654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25777== by 0x109A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25777== by 0x1093DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25777== by 0xF611D38: PetscInitialize (pinit.c:924) ==25777== by 0xF4E9079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25777== by 0xF4E90C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25777== by 0x12F3BB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25777== by 0x12A2AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25777== by 0x12CDFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25777== by 0x12CC9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25777== by 0x12D333: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25777== by 0x1286D5: main (TestSimulationsWithEllipticGrowingDomainPdeModifier.cpp:19) ==25777== ==25777== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25777== at 0x110A0A1C: __open_nocancel (open64_nocancel.c:39) ==25777== by 0x11024BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25777== by 0x1089B822: ??? ==25777== by 0x1089B96F: ??? ==25777== by 0x14D0A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25777== by 0x14D0A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25777== by 0x14CC0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25777== by 0x14C652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25777== by 0x109A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25777== by 0x1093DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25777== by 0xF611D38: PetscInitialize (pinit.c:924) ==25777== by 0xF4E9079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25777== by 0xF4E90C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25777== by 0x12F3BB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25777== by 0x12A2AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25777== by 0x12CDFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25777== by 0x12CC9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25777== by 0x12D333: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25777== by 0x1286D5: main (TestSimulationsWithEllipticGrowingDomainPdeModifier.cpp:19) ==25777== ==25777== Open file descriptor 152: ==25777== ==25777== ==25777== Open file descriptor 149: ==25777== ==25777== ==25777== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticGrowingDomainPdeModifier_valgrind.txt ==25777== ==25777== ==25777== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25777== ==25777== ==25777== ==25777== HEAP SUMMARY: ==25777== in use at exit: 618,366 bytes in 8,236 blocks ==25777== total heap usage: 5,221,412 allocs, 5,213,176 frees, 2,325,854,263 bytes allocated ==25777== ==25777== LEAK SUMMARY: ==25777== definitely lost: 0 bytes in 0 blocks ==25777== indirectly lost: 0 bytes in 0 blocks ==25777== possibly lost: 0 bytes in 0 blocks ==25777== still reachable: 56 bytes in 3 blocks ==25777== suppressed: 618,310 bytes in 8,233 blocks ==25777== Reachable blocks (those to which a pointer was found) are not shown. ==25777== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25777== ==25777== For lists of detected and suppressed errors, rerun with: -s ==25777== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)