==26311== Memcheck, a memory error detector ==26311== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26311== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26311== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==26311== Parent PID: 24276 ==26311== ==26311== ==26311== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26311== Open file descriptor 12: ==26311== at 0x10E0107D: pipe (pipe.c:29) ==26311== by 0x1971807D: ??? ==26311== by 0x14C7D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26311== by 0x10622418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26311== by 0x105BBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26311== by 0xF28FD38: PetscInitialize (pinit.c:924) ==26311== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26311== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26311== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26311== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26311== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26311== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26311== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26311== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==26311== ==26311== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26311== at 0x10E05A1C: __open_nocancel (open64_nocancel.c:39) ==26311== by 0x10D89BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26311== by 0x10519822: ??? ==26311== by 0x1051996F: ??? ==26311== by 0x14D246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26311== by 0x14D24938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26311== by 0x14CDA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26311== by 0x14C7D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26311== by 0x10622418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26311== by 0x105BBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26311== by 0xF28FD38: PetscInitialize (pinit.c:924) ==26311== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26311== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26311== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26311== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26311== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26311== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26311== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26311== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==26311== ==26311== Open file descriptor 152: ==26311== ==26311== ==26311== Open file descriptor 149: ==26311== ==26311== ==26311== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==26311== ==26311== ==26311== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26311== ==26311== ==26311== ==26311== HEAP SUMMARY: ==26311== in use at exit: 618,439 bytes in 8,240 blocks ==26311== total heap usage: 232,870 allocs, 224,630 frees, 1,364,534,636 bytes allocated ==26311== ==26311== LEAK SUMMARY: ==26311== definitely lost: 0 bytes in 0 blocks ==26311== indirectly lost: 0 bytes in 0 blocks ==26311== possibly lost: 0 bytes in 0 blocks ==26311== still reachable: 56 bytes in 3 blocks ==26311== suppressed: 618,383 bytes in 8,237 blocks ==26311== Reachable blocks (those to which a pointer was found) are not shown. ==26311== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26311== ==26311== For lists of detected and suppressed errors, rerun with: -s ==26311== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)