==40286== Memcheck, a memory error detector ==40286== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40286== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40286== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDifferentialAdhesionSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==40286== Parent PID: 24276 ==40286== ==40286== ==40286== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40286== Open file descriptor 12: ==40286== at 0x10D1A07D: pipe (pipe.c:29) ==40286== by 0x1971807D: ??? ==40286== by 0x14C7D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40286== by 0x10622418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40286== by 0x105BBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40286== by 0xF28FD38: PetscInitialize (pinit.c:924) ==40286== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40286== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40286== by 0x123D23: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40286== by 0x11F693: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40286== by 0x1218FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40286== by 0x1217F8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40286== by 0x121E0B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40286== by 0x11DE95: main (TestRunningDifferentialAdhesionSimulationsTutorial.cpp:18) ==40286== ==40286== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40286== at 0x10D1EA1C: __open_nocancel (open64_nocancel.c:39) ==40286== by 0x10CA2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40286== by 0x10519822: ??? ==40286== by 0x1051996F: ??? ==40286== by 0x14D246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40286== by 0x14D24938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40286== by 0x14CDA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40286== by 0x14C7D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40286== by 0x10622418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40286== by 0x105BBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40286== by 0xF28FD38: PetscInitialize (pinit.c:924) ==40286== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40286== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40286== by 0x123D23: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40286== by 0x11F693: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40286== by 0x1218FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40286== by 0x1217F8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40286== by 0x121E0B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40286== by 0x11DE95: main (TestRunningDifferentialAdhesionSimulationsTutorial.cpp:18) ==40286== ==40286== Open file descriptor 152: ==40286== ==40286== ==40286== Open file descriptor 149: ==40286== ==40286== ==40286== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDifferentialAdhesionSimulationsTutorial_valgrind.txt ==40286== ==40286== ==40286== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40286== ==40286== ==40286== ==40286== HEAP SUMMARY: ==40286== in use at exit: 618,382 bytes in 8,237 blocks ==40286== total heap usage: 2,563,970 allocs, 2,555,733 frees, 1,464,029,918 bytes allocated ==40286== ==40286== LEAK SUMMARY: ==40286== definitely lost: 0 bytes in 0 blocks ==40286== indirectly lost: 0 bytes in 0 blocks ==40286== possibly lost: 0 bytes in 0 blocks ==40286== still reachable: 72 bytes in 4 blocks ==40286== suppressed: 618,310 bytes in 8,233 blocks ==40286== Reachable blocks (those to which a pointer was found) are not shown. ==40286== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40286== ==40286== For lists of detected and suppressed errors, rerun with: -s ==40286== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)