==41876== Memcheck, a memory error detector ==41876== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41876== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41876== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestGeneralizedRushLarsen -malloc_debug -malloc_dump -memory_info ==41876== Parent PID: 24252 ==41876== ==41876== ==41876== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41876== Open file descriptor 12: ==41876== at 0x87B007D: pipe (pipe.c:29) ==41876== by 0x1433007D: ??? ==41876== by 0xEE294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41876== by 0x9EAB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41876== by 0x9E44D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41876== by 0x8B3BD38: PetscInitialize (pinit.c:924) ==41876== by 0x83DF079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41876== by 0x83DF0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41876== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41876== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41876== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41876== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41876== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41876== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==41876== ==41876== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41876== at 0x87B4A1C: __open_nocancel (open64_nocancel.c:39) ==41876== by 0x8738BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41876== by 0x8413822: ??? ==41876== by 0x841396F: ??? ==41876== by 0xEED06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41876== by 0xEED0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41876== by 0xEE86922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41876== by 0xEE292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41876== by 0x9EAB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41876== by 0x9E44D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41876== by 0x8B3BD38: PetscInitialize (pinit.c:924) ==41876== by 0x83DF079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41876== by 0x83DF0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41876== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41876== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41876== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41876== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41876== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41876== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==41876== ==41876== Open file descriptor 152: ==41876== ==41876== ==41876== Open file descriptor 149: ==41876== ==41876== ==41876== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGeneralizedRushLarsen_valgrind.txt ==41876== ==41876== ==41876== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41876== ==41876== ==41876== ==41876== HEAP SUMMARY: ==41876== in use at exit: 621,955 bytes in 8,243 blocks ==41876== total heap usage: 3,054,223 allocs, 3,045,980 frees, 1,613,061,726 bytes allocated ==41876== ==41876== LEAK SUMMARY: ==41876== definitely lost: 0 bytes in 0 blocks ==41876== indirectly lost: 0 bytes in 0 blocks ==41876== possibly lost: 0 bytes in 0 blocks ==41876== still reachable: 3,629 bytes in 10 blocks ==41876== suppressed: 618,326 bytes in 8,233 blocks ==41876== Reachable blocks (those to which a pointer was found) are not shown. ==41876== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41876== ==41876== For lists of detected and suppressed errors, rerun with: -s ==41876== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)