==26813== Memcheck, a memory error detector ==26813== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26813== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26813== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithBuskeForces -malloc_debug -malloc_dump -memory_info ==26813== Parent PID: 24252 ==26813== ==26813== ==26813== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26813== Open file descriptor 12: ==26813== at 0xF94A07D: pipe (pipe.c:29) ==26813== by 0x1971807D: ??? ==26813== by 0x14D1D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26813== by 0x115A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26813== by 0x11541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26813== by 0x10236D38: PetscInitialize (pinit.c:924) ==26813== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26813== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26813== by 0x1241FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26813== by 0x11F593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26813== by 0x121AD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26813== by 0x1219D3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26813== by 0x121FE7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26813== by 0x11DD95: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==26813== ==26813== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26813== at 0xF94EA1C: __open_nocancel (open64_nocancel.c:39) ==26813== by 0xF8D2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26813== by 0xF19B822: ??? ==26813== by 0xF19B96F: ??? ==26813== by 0x14DC26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26813== by 0x14DC2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26813== by 0x14D78922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26813== by 0x14D1D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26813== by 0x115A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26813== by 0x11541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26813== by 0x10236D38: PetscInitialize (pinit.c:924) ==26813== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26813== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26813== by 0x1241FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26813== by 0x11F593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26813== by 0x121AD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26813== by 0x1219D3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26813== by 0x121FE7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26813== by 0x11DD95: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==26813== ==26813== Open file descriptor 152: ==26813== ==26813== ==26813== Open file descriptor 149: ==26813== ==26813== ==26813== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithBuskeForces_valgrind.txt ==26813== ==26813== ==26813== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26813== ==26813== ==26813== ==26813== HEAP SUMMARY: ==26813== in use at exit: 618,366 bytes in 8,236 blocks ==26813== total heap usage: 3,736,857 allocs, 3,728,621 frees, 4,487,498,526 bytes allocated ==26813== ==26813== LEAK SUMMARY: ==26813== definitely lost: 0 bytes in 0 blocks ==26813== indirectly lost: 0 bytes in 0 blocks ==26813== possibly lost: 0 bytes in 0 blocks ==26813== still reachable: 56 bytes in 3 blocks ==26813== suppressed: 618,310 bytes in 8,233 blocks ==26813== Reachable blocks (those to which a pointer was found) are not shown. ==26813== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26813== ==26813== For lists of detected and suppressed errors, rerun with: -s ==26813== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)