==26457== Memcheck, a memory error detector ==26457== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26457== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26457== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26457== Parent PID: 24230 ==26457== ==26457== ==26457== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26457== Open file descriptor 12: ==26457== at 0x10D5C07D: pipe (pipe.c:29) ==26457== by 0x1971807D: ??? ==26457== by 0x14C7D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26457== by 0x10622418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26457== by 0x105BBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26457== by 0xF28FD38: PetscInitialize (pinit.c:924) ==26457== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26457== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26457== by 0x3F7529: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26457== by 0x3EC0B9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26457== by 0x3F20D4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26457== by 0x3F1F74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26457== by 0x3F260B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26457== by 0x3EA4D5: main (TestVertexBasedCellPopulation.cpp:19) ==26457== ==26457== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26457== at 0x10D60A1C: __open_nocancel (open64_nocancel.c:39) ==26457== by 0x10CE4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26457== by 0x1051F822: ??? ==26457== by 0x1051F96F: ??? ==26457== by 0x14D246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26457== by 0x14D24938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26457== by 0x14CDA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26457== by 0x14C7D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26457== by 0x10622418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26457== by 0x105BBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26457== by 0xF28FD38: PetscInitialize (pinit.c:924) ==26457== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26457== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26457== by 0x3F7529: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26457== by 0x3EC0B9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26457== by 0x3F20D4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26457== by 0x3F1F74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26457== by 0x3F260B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26457== by 0x3EA4D5: main (TestVertexBasedCellPopulation.cpp:19) ==26457== ==26457== Open file descriptor 152: ==26457== ==26457== ==26457== Open file descriptor 149: ==26457== ==26457== ==26457== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexBasedCellPopulation_valgrind.txt ==26457== ==26457== ==26457== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26457== ==26457== ==26457== ==26457== HEAP SUMMARY: ==26457== in use at exit: 618,439 bytes in 8,240 blocks ==26457== total heap usage: 171,066 allocs, 162,826 frees, 1,350,791,585 bytes allocated ==26457== ==26457== LEAK SUMMARY: ==26457== definitely lost: 0 bytes in 0 blocks ==26457== indirectly lost: 0 bytes in 0 blocks ==26457== possibly lost: 0 bytes in 0 blocks ==26457== still reachable: 56 bytes in 3 blocks ==26457== suppressed: 618,383 bytes in 8,237 blocks ==26457== Reachable blocks (those to which a pointer was found) are not shown. ==26457== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26457== ==26457== For lists of detected and suppressed errors, rerun with: -s ==26457== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)