==43968== Memcheck, a memory error detector ==43968== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43968== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43968== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHeterogeneousConductivities -malloc_debug -malloc_dump -memory_info ==43968== Parent PID: 24133 ==43968== ==43968== ==43968== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43968== Open file descriptor 12: ==43968== at 0xA7EA07D: pipe (pipe.c:29) ==43968== by 0x1433007D: ??? ==43968== by 0xFB364CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43968== by 0xBEE3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43968== by 0xBE7CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43968== by 0xAB73D38: PetscInitialize (pinit.c:924) ==43968== by 0xA0D2079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43968== by 0xA0D20C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43968== by 0x11BF54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43968== by 0x1174B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43968== by 0x119942: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43968== by 0x11983E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43968== by 0x119E51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43968== by 0x115CB5: main (TestHeterogeneousConductivities.cpp:18) ==43968== ==43968== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43968== at 0xA7EEA1C: __open_nocancel (open64_nocancel.c:39) ==43968== by 0xA772BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43968== by 0xA10C822: ??? ==43968== by 0xA10C96F: ??? ==43968== by 0xFBDB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43968== by 0xFBDB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43968== by 0xFB91922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43968== by 0xFB362DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43968== by 0xBEE3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43968== by 0xBE7CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43968== by 0xAB73D38: PetscInitialize (pinit.c:924) ==43968== by 0xA0D2079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43968== by 0xA0D20C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43968== by 0x11BF54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43968== by 0x1174B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43968== by 0x119942: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43968== by 0x11983E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43968== by 0x119E51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43968== by 0x115CB5: main (TestHeterogeneousConductivities.cpp:18) ==43968== ==43968== Open file descriptor 152: ==43968== ==43968== ==43968== Open file descriptor 149: ==43968== ==43968== ==43968== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHeterogeneousConductivities_valgrind.txt ==43968== ==43968== ==43968== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43968== ==43968== ==43968== ==43968== HEAP SUMMARY: ==43968== in use at exit: 618,899 bytes in 8,249 blocks ==43968== total heap usage: 201,474 allocs, 193,225 frees, 1,372,567,548 bytes allocated ==43968== ==43968== LEAK SUMMARY: ==43968== definitely lost: 0 bytes in 0 blocks ==43968== indirectly lost: 0 bytes in 0 blocks ==43968== possibly lost: 0 bytes in 0 blocks ==43968== still reachable: 24 bytes in 2 blocks ==43968== suppressed: 618,875 bytes in 8,247 blocks ==43968== Reachable blocks (those to which a pointer was found) are not shown. ==43968== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43968== ==43968== For lists of detected and suppressed errors, rerun with: -s ==43968== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 40 from 38)