==26178== Memcheck, a memory error detector ==26178== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26178== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26178== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==26178== Parent PID: 24133 ==26178== ==26178== ==26178== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26178== Open file descriptor 12: ==26178== at 0xF94A07D: pipe (pipe.c:29) ==26178== by 0x1971807D: ??? ==26178== by 0x14D1D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26178== by 0x115A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26178== by 0x11541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26178== by 0x10236D38: PetscInitialize (pinit.c:924) ==26178== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26178== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26178== by 0x13F4FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26178== by 0x13824D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26178== by 0x13AF0A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26178== by 0x13ADAA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26178== by 0x13B441: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26178== by 0x136675: main (TestNodeBasedCellPopulationParallelMethods.cpp:19) ==26178== ==26178== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26178== at 0xF94EA1C: __open_nocancel (open64_nocancel.c:39) ==26178== by 0xF8D2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26178== by 0xF1A1822: ??? ==26178== by 0xF1A196F: ??? ==26178== by 0x14DC26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26178== by 0x14DC2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26178== by 0x14D78922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26178== by 0x14D1D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26178== by 0x115A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26178== by 0x11541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26178== by 0x10236D38: PetscInitialize (pinit.c:924) ==26178== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26178== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26178== by 0x13F4FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26178== by 0x13824D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26178== by 0x13AF0A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26178== by 0x13ADAA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26178== by 0x13B441: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26178== by 0x136675: main (TestNodeBasedCellPopulationParallelMethods.cpp:19) ==26178== ==26178== Open file descriptor 152: ==26178== ==26178== ==26178== Open file descriptor 149: ==26178== ==26178== ==26178== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationParallelMethods_valgrind.txt ==26178== ==26178== ==26178== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26178== ==26178== ==26178== ==26178== HEAP SUMMARY: ==26178== in use at exit: 618,435 bytes in 8,240 blocks ==26178== total heap usage: 65,160 allocs, 56,920 frees, 1,343,015,027 bytes allocated ==26178== ==26178== LEAK SUMMARY: ==26178== definitely lost: 0 bytes in 0 blocks ==26178== indirectly lost: 0 bytes in 0 blocks ==26178== possibly lost: 0 bytes in 0 blocks ==26178== still reachable: 56 bytes in 3 blocks ==26178== suppressed: 618,379 bytes in 8,237 blocks ==26178== Reachable blocks (those to which a pointer was found) are not shown. ==26178== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26178== ==26178== For lists of detected and suppressed errors, rerun with: -s ==26178== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)