==40419== Memcheck, a memory error detector ==40419== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40419== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40419== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestWntConcentration -malloc_debug -malloc_dump -memory_info ==40419== Parent PID: 24133 ==40419== ==40419== ==40419== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40419== Open file descriptor 12: ==40419== at 0x1270307D: pipe (pipe.c:29) ==40419== by 0x1B3D807D: ??? ==40419== by 0x1653C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40419== by 0x11F24418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40419== by 0x11EBDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40419== by 0x10BB4D38: PetscInitialize (pinit.c:924) ==40419== by 0x10A8C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40419== by 0x10A8C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40419== by 0x1449B9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40419== by 0x13F409: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40419== by 0x14221A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40419== by 0x1420BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40419== by 0x142751: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40419== by 0x13D825: main (TestWntConcentration.cpp:19) ==40419== ==40419== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40419== at 0x12707A1C: __open_nocancel (open64_nocancel.c:39) ==40419== by 0x1268BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40419== by 0x6122822: ??? ==40419== by 0x612296F: ??? ==40419== by 0x165E36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40419== by 0x165E3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40419== by 0x16599922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40419== by 0x1653C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40419== by 0x11F24418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40419== by 0x11EBDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40419== by 0x10BB4D38: PetscInitialize (pinit.c:924) ==40419== by 0x10A8C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40419== by 0x10A8C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40419== by 0x1449B9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40419== by 0x13F409: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40419== by 0x14221A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40419== by 0x1420BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40419== by 0x142751: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40419== by 0x13D825: main (TestWntConcentration.cpp:19) ==40419== ==40419== Open file descriptor 152: ==40419== ==40419== ==40419== Open file descriptor 149: ==40419== ==40419== ==40419== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestWntConcentration_valgrind.txt ==40419== ==40419== ==40419== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40419== ==40419== ==40419== ==40419== HEAP SUMMARY: ==40419== in use at exit: 618,531 bytes in 8,241 blocks ==40419== total heap usage: 56,717 allocs, 48,476 frees, 1,340,527,025 bytes allocated ==40419== ==40419== LEAK SUMMARY: ==40419== definitely lost: 0 bytes in 0 blocks ==40419== indirectly lost: 0 bytes in 0 blocks ==40419== possibly lost: 0 bytes in 0 blocks ==40419== still reachable: 136 bytes in 4 blocks ==40419== suppressed: 618,395 bytes in 8,237 blocks ==40419== Reachable blocks (those to which a pointer was found) are not shown. ==40419== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40419== ==40419== For lists of detected and suppressed errors, rerun with: -s ==40419== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)