==41994== Memcheck, a memory error detector ==41994== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41994== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41994== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==41994== Parent PID: 24189 ==41994== ==41994== ==41994== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41994== Open file descriptor 12: ==41994== at 0x856E07D: pipe (pipe.c:29) ==41994== by 0x1433007D: ??? ==41994== by 0xEE294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41994== by 0x9C69418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41994== by 0x9C02D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41994== by 0x88F9D38: PetscInitialize (pinit.c:924) ==41994== by 0x819B079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41994== by 0x819B0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41994== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41994== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41994== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41994== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41994== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41994== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==41994== ==41994== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41994== at 0x8572A1C: __open_nocancel (open64_nocancel.c:39) ==41994== by 0x84F6BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41994== by 0x81D5822: ??? ==41994== by 0x81D596F: ??? ==41994== by 0xEED06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41994== by 0xEED0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41994== by 0xEE86922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41994== by 0xEE292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41994== by 0x9C69418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41994== by 0x9C02D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41994== by 0x88F9D38: PetscInitialize (pinit.c:924) ==41994== by 0x819B079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41994== by 0x819B0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41994== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41994== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41994== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41994== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41994== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41994== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==41994== ==41994== Open file descriptor 152: ==41994== ==41994== ==41994== Open file descriptor 149: ==41994== ==41994== ==41994== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==41994== ==41994== ==41994== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41994== ==41994== ==41994== ==41994== HEAP SUMMARY: ==41994== in use at exit: 618,419 bytes in 8,239 blocks ==41994== total heap usage: 49,005 allocs, 40,766 frees, 1,338,876,130 bytes allocated ==41994== ==41994== LEAK SUMMARY: ==41994== definitely lost: 0 bytes in 0 blocks ==41994== indirectly lost: 0 bytes in 0 blocks ==41994== possibly lost: 0 bytes in 0 blocks ==41994== still reachable: 24 bytes in 2 blocks ==41994== suppressed: 618,395 bytes in 8,237 blocks ==41994== Reachable blocks (those to which a pointer was found) are not shown. ==41994== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41994== ==41994== For lists of detected and suppressed errors, rerun with: -s ==41994== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)