==40844== Memcheck, a memory error detector ==40844== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40844== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40844== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestPottsBasedCryptSimulation -malloc_debug -malloc_dump -memory_info ==40844== Parent PID: 24191 ==40844== ==40844== ==40844== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40844== Open file descriptor 12: ==40844== at 0x1112307D: pipe (pipe.c:29) ==40844== by 0x1B3DA07D: ??? ==40844== by 0x165DC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40844== by 0x12EAA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40844== by 0x12E43D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40844== by 0x11B3AD38: PetscInitialize (pinit.c:924) ==40844== by 0x10A27079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40844== by 0x10A270C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40844== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40844== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40844== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40844== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40844== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40844== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==40844== ==40844== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40844== at 0x11127A1C: __open_nocancel (open64_nocancel.c:39) ==40844== by 0x110ABBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40844== by 0x10A61822: ??? ==40844== by 0x10A6196F: ??? ==40844== by 0x166816DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40844== by 0x16681938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40844== by 0x16637922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40844== by 0x165DC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40844== by 0x12EAA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40844== by 0x12E43D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40844== by 0x11B3AD38: PetscInitialize (pinit.c:924) ==40844== by 0x10A27079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40844== by 0x10A270C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40844== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40844== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40844== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40844== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40844== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40844== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==40844== ==40844== Open file descriptor 152: ==40844== ==40844== ==40844== Open file descriptor 149: ==40844== ==40844== ==40844== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCryptSimulation_valgrind.txt ==40844== ==40844== ==40844== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40844== ==40844== ==40844== ==40844== HEAP SUMMARY: ==40844== in use at exit: 618,460 bytes in 8,237 blocks ==40844== total heap usage: 46,840,633 allocs, 46,832,396 frees, 5,592,957,638 bytes allocated ==40844== ==40844== LEAK SUMMARY: ==40844== definitely lost: 0 bytes in 0 blocks ==40844== indirectly lost: 0 bytes in 0 blocks ==40844== possibly lost: 0 bytes in 0 blocks ==40844== still reachable: 136 bytes in 4 blocks ==40844== suppressed: 618,324 bytes in 8,233 blocks ==40844== Reachable blocks (those to which a pointer was found) are not shown. ==40844== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40844== ==40844== For lists of detected and suppressed errors, rerun with: -s ==40844== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)