==25813== Memcheck, a memory error detector ==25813== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25813== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25813== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithParabolicBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25813== Parent PID: 24191 ==25813== ==25813== ==25813== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25813== Open file descriptor 12: ==25813== at 0x110B707D: pipe (pipe.c:29) ==25813== by 0x1971707D: ??? ==25813== by 0x14C824CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25813== by 0x109BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25813== by 0x10958D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25813== by 0xF62CD38: PetscInitialize (pinit.c:924) ==25813== by 0xF504079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25813== by 0xF5040C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25813== by 0x129501: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25813== by 0x1249F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25813== by 0x126F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25813== by 0x126E65: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25813== by 0x127479: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25813== by 0x1231F5: main (TestSimulationsWithParabolicBoxDomainPdeModifier.cpp:18) ==25813== ==25813== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25813== at 0x110BBA1C: __open_nocancel (open64_nocancel.c:39) ==25813== by 0x1103FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25813== by 0x108BC822: ??? ==25813== by 0x108BC96F: ??? ==25813== by 0x14D276DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25813== by 0x14D27938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25813== by 0x14CDD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25813== by 0x14C822DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25813== by 0x109BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25813== by 0x10958D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25813== by 0xF62CD38: PetscInitialize (pinit.c:924) ==25813== by 0xF504079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25813== by 0xF5040C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25813== by 0x129501: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25813== by 0x1249F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25813== by 0x126F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25813== by 0x126E65: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25813== by 0x127479: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25813== by 0x1231F5: main (TestSimulationsWithParabolicBoxDomainPdeModifier.cpp:18) ==25813== ==25813== Open file descriptor 152: ==25813== ==25813== ==25813== Open file descriptor 149: ==25813== ==25813== ==25813== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithParabolicBoxDomainPdeModifier_valgrind.txt ==25813== ==25813== ==25813== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25813== ==25813== ==25813== ==25813== HEAP SUMMARY: ==25813== in use at exit: 618,364 bytes in 8,236 blocks ==25813== total heap usage: 4,549,504 allocs, 4,541,268 frees, 1,834,400,444 bytes allocated ==25813== ==25813== LEAK SUMMARY: ==25813== definitely lost: 0 bytes in 0 blocks ==25813== indirectly lost: 0 bytes in 0 blocks ==25813== possibly lost: 0 bytes in 0 blocks ==25813== still reachable: 56 bytes in 3 blocks ==25813== suppressed: 618,308 bytes in 8,233 blocks ==25813== Reachable blocks (those to which a pointer was found) are not shown. ==25813== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25813== ==25813== For lists of detected and suppressed errors, rerun with: -s ==25813== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)