==42987== Memcheck, a memory error detector ==42987== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42987== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42987== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCardiacElectroMechanicsProblem -malloc_debug -malloc_dump -memory_info ==42987== Parent PID: 24028 ==42987== ==42987== ==42987== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42987== Open file descriptor 12: ==42987== at 0xABFB07D: pipe (pipe.c:29) ==42987== by 0x1433007D: ??? ==42987== by 0xD95E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42987== by 0xA402418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42987== by 0xA39BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42987== by 0xAE06D38: PetscInitialize (pinit.c:924) ==42987== by 0xA2C5079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42987== by 0xA2C50C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42987== by 0x1331FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42987== by 0x12C2AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42987== by 0x12F672: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42987== by 0x12F512: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42987== by 0x12FBA9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42987== by 0x12A6D5: main (TestCardiacElectroMechanicsProblem.cpp:19) ==42987== ==42987== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42987== at 0xABFFA1C: __open_nocancel (open64_nocancel.c:39) ==42987== by 0xAB83BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42987== by 0xA2F9822: ??? ==42987== by 0xA2F996F: ??? ==42987== by 0xDA036DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42987== by 0xDA03938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42987== by 0xD9B9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42987== by 0xD95E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42987== by 0xA402418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42987== by 0xA39BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42987== by 0xAE06D38: PetscInitialize (pinit.c:924) ==42987== by 0xA2C5079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42987== by 0xA2C50C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42987== by 0x1331FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42987== by 0x12C2AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42987== by 0x12F672: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42987== by 0x12F512: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42987== by 0x12FBA9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42987== by 0x12A6D5: main (TestCardiacElectroMechanicsProblem.cpp:19) ==42987== ==42987== Open file descriptor 145: ==42987== ==42987== ==42987== Open file descriptor 142: ==42987== ==42987== ==42987== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCardiacElectroMechanicsProblem_valgrind.txt ==42987== ==42987== ==42987== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42987== ==42987== ==42987== ==42987== HEAP SUMMARY: ==42987== in use at exit: 618,911 bytes in 8,249 blocks ==42987== total heap usage: 583,440 allocs, 575,191 frees, 1,482,855,941 bytes allocated ==42987== ==42987== LEAK SUMMARY: ==42987== definitely lost: 0 bytes in 0 blocks ==42987== indirectly lost: 0 bytes in 0 blocks ==42987== possibly lost: 0 bytes in 0 blocks ==42987== still reachable: 24 bytes in 2 blocks ==42987== suppressed: 618,887 bytes in 8,247 blocks ==42987== Reachable blocks (those to which a pointer was found) are not shown. ==42987== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42987== ==42987== For lists of detected and suppressed errors, rerun with: -s ==42987== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 79 from 38)