==40083== Memcheck, a memory error detector ==40083== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40083== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40083== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptCellsGenerator -malloc_debug -malloc_dump -memory_info ==40083== Parent PID: 24028 ==40083== ==40083== ==40083== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40083== Open file descriptor 12: ==40083== at 0x125DA07D: pipe (pipe.c:29) ==40083== by 0x1B3D807D: ??? ==40083== by 0x1653C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40083== by 0x11EE2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40083== by 0x11E7BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40083== by 0x10B4FD38: PetscInitialize (pinit.c:924) ==40083== by 0x10A27079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40083== by 0x10A270C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40083== by 0x1222A9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40083== by 0x11D653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40083== by 0x11FD06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40083== by 0x11FC01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40083== by 0x120215: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40083== by 0x11BE55: main (TestCryptCellsGenerator.cpp:18) ==40083== ==40083== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40083== at 0x125DEA1C: __open_nocancel (open64_nocancel.c:39) ==40083== by 0x12562BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40083== by 0x11DD9822: ??? ==40083== by 0x11DD996F: ??? ==40083== by 0x165E36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40083== by 0x165E3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40083== by 0x16599922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40083== by 0x1653C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40083== by 0x11EE2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40083== by 0x11E7BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40083== by 0x10B4FD38: PetscInitialize (pinit.c:924) ==40083== by 0x10A27079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40083== by 0x10A270C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40083== by 0x1222A9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40083== by 0x11D653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40083== by 0x11FD06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40083== by 0x11FC01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40083== by 0x120215: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40083== by 0x11BE55: main (TestCryptCellsGenerator.cpp:18) ==40083== ==40083== Open file descriptor 145: ==40083== ==40083== ==40083== Open file descriptor 142: ==40083== ==40083== ==40083== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptCellsGenerator_valgrind.txt ==40083== ==40083== ==40083== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40083== ==40083== ==40083== ==40083== HEAP SUMMARY: ==40083== in use at exit: 618,591 bytes in 8,241 blocks ==40083== total heap usage: 87,313 allocs, 79,072 frees, 1,342,607,942 bytes allocated ==40083== ==40083== LEAK SUMMARY: ==40083== definitely lost: 0 bytes in 0 blocks ==40083== indirectly lost: 0 bytes in 0 blocks ==40083== possibly lost: 0 bytes in 0 blocks ==40083== still reachable: 184 bytes in 4 blocks ==40083== suppressed: 618,407 bytes in 8,237 blocks ==40083== Reachable blocks (those to which a pointer was found) are not shown. ==40083== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40083== ==40083== For lists of detected and suppressed errors, rerun with: -s ==40083== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)