==26048== Memcheck, a memory error detector ==26048== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26048== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26048== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithBuskeUpdate -malloc_debug -malloc_dump -memory_info ==26048== Parent PID: 24028 ==26048== ==26048== ==26048== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26048== Open file descriptor 12: ==26048== at 0xF8A507D: pipe (pipe.c:29) ==26048== by 0x1971807D: ??? ==26048== by 0x14D1D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26048== by 0x11503418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26048== by 0x1149CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26048== by 0x10191D38: PetscInitialize (pinit.c:924) ==26048== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26048== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26048== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26048== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26048== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26048== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26048== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26048== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==26048== ==26048== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26048== at 0xF8A9A1C: __open_nocancel (open64_nocancel.c:39) ==26048== by 0xF82DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26048== by 0xF19B822: ??? ==26048== by 0xF19B96F: ??? ==26048== by 0x14DC26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26048== by 0x14DC2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26048== by 0x14D78922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26048== by 0x14D1D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26048== by 0x11503418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26048== by 0x1149CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26048== by 0x10191D38: PetscInitialize (pinit.c:924) ==26048== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26048== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26048== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26048== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26048== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26048== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26048== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26048== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==26048== ==26048== Open file descriptor 145: ==26048== ==26048== ==26048== Open file descriptor 142: ==26048== ==26048== ==26048== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithBuskeUpdate_valgrind.txt ==26048== ==26048== ==26048== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26048== ==26048== ==26048== ==26048== HEAP SUMMARY: ==26048== in use at exit: 618,447 bytes in 8,240 blocks ==26048== total heap usage: 57,252 allocs, 49,012 frees, 1,340,570,077 bytes allocated ==26048== ==26048== LEAK SUMMARY: ==26048== definitely lost: 0 bytes in 0 blocks ==26048== indirectly lost: 0 bytes in 0 blocks ==26048== possibly lost: 0 bytes in 0 blocks ==26048== still reachable: 56 bytes in 3 blocks ==26048== suppressed: 618,391 bytes in 8,237 blocks ==26048== Reachable blocks (those to which a pointer was found) are not shown. ==26048== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26048== ==26048== For lists of detected and suppressed errors, rerun with: -s ==26048== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)