==41077== Memcheck, a memory error detector ==41077== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41077== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41077== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==41077== Parent PID: 24706 ==41077== ==41077== ==41077== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41077== Open file descriptor 12: ==41077== at 0x1124E07D: pipe (pipe.c:29) ==41077== by 0x1B3DA07D: ??? ==41077== by 0x165DC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41077== by 0x12EC4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41077== by 0x12E5DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41077== by 0x11B3AD38: PetscInitialize (pinit.c:924) ==41077== by 0x10A8C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41077== by 0x10A8C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41077== by 0x23B368: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41077== by 0x231839: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41077== by 0x235F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41077== by 0x235E0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41077== by 0x2364A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41077== by 0x22FC55: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==41077== ==41077== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41077== at 0x11252A1C: __open_nocancel (open64_nocancel.c:39) ==41077== by 0x111D6BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41077== by 0x611C822: ??? ==41077== by 0x611C96F: ??? ==41077== by 0x166816DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41077== by 0x16681938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41077== by 0x16637922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41077== by 0x165DC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41077== by 0x12EC4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41077== by 0x12E5DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41077== by 0x11B3AD38: PetscInitialize (pinit.c:924) ==41077== by 0x10A8C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41077== by 0x10A8C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41077== by 0x23B368: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41077== by 0x231839: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41077== by 0x235F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41077== by 0x235E0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41077== by 0x2364A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41077== by 0x22FC55: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==41077== ==41077== Open file descriptor 145: ==41077== ==41077== ==41077== Open file descriptor 142: ==41077== ==41077== ==41077== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==41077== ==41077== ==41077== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41077== ==41077== ==41077== ==41077== HEAP SUMMARY: ==41077== in use at exit: 618,386 bytes in 8,236 blocks ==41077== total heap usage: 6,310,790 allocs, 6,302,554 frees, 2,059,218,388 bytes allocated ==41077== ==41077== LEAK SUMMARY: ==41077== definitely lost: 0 bytes in 0 blocks ==41077== indirectly lost: 0 bytes in 0 blocks ==41077== possibly lost: 0 bytes in 0 blocks ==41077== still reachable: 56 bytes in 3 blocks ==41077== suppressed: 618,330 bytes in 8,233 blocks ==41077== Reachable blocks (those to which a pointer was found) are not shown. ==41077== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41077== ==41077== For lists of detected and suppressed errors, rerun with: -s ==41077== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)