==41785== Memcheck, a memory error detector ==41785== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41785== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41785== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainTissue -malloc_debug -malloc_dump -memory_info ==41785== Parent PID: 24706 ==41785== ==41785== ==41785== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41785== Open file descriptor 12: ==41785== at 0xBBAA07D: pipe (pipe.c:29) ==41785== by 0x1433007D: ??? ==41785== by 0xFB6B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41785== by 0xBF78418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41785== by 0xBF11D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41785== by 0x8258D38: PetscInitialize (pinit.c:924) ==41785== by 0xB4B5079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41785== by 0xB4B50C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41785== by 0x13BB6A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41785== by 0x136223: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41785== by 0x1389FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41785== by 0x1388F6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41785== by 0x138F09: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41785== by 0x134A25: main (TestExtendedBidomainTissue.cpp:18) ==41785== ==41785== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41785== at 0xBBAEA1C: __open_nocancel (open64_nocancel.c:39) ==41785== by 0xBB32BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41785== by 0x80FD822: ??? ==41785== by 0x80FD96F: ??? ==41785== by 0xFC106DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41785== by 0xFC10938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41785== by 0xFBC6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41785== by 0xFB6B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41785== by 0xBF78418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41785== by 0xBF11D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41785== by 0x8258D38: PetscInitialize (pinit.c:924) ==41785== by 0xB4B5079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41785== by 0xB4B50C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41785== by 0x13BB6A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41785== by 0x136223: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41785== by 0x1389FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41785== by 0x1388F6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41785== by 0x138F09: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41785== by 0x134A25: main (TestExtendedBidomainTissue.cpp:18) ==41785== ==41785== Open file descriptor 145: ==41785== ==41785== ==41785== Open file descriptor 142: ==41785== ==41785== ==41785== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainTissue_valgrind.txt ==41785== ==41785== ==41785== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41785== ==41785== ==41785== ==41785== HEAP SUMMARY: ==41785== in use at exit: 618,431 bytes in 8,239 blocks ==41785== total heap usage: 120,935 allocs, 112,696 frees, 1,354,687,998 bytes allocated ==41785== ==41785== LEAK SUMMARY: ==41785== definitely lost: 0 bytes in 0 blocks ==41785== indirectly lost: 0 bytes in 0 blocks ==41785== possibly lost: 0 bytes in 0 blocks ==41785== still reachable: 24 bytes in 2 blocks ==41785== suppressed: 618,407 bytes in 8,237 blocks ==41785== Reachable blocks (those to which a pointer was found) are not shown. ==41785== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41785== ==41785== For lists of detected and suppressed errors, rerun with: -s ==41785== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)