==27018== Memcheck, a memory error detector ==27018== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==27018== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==27018== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNumericalMethods -malloc_debug -malloc_dump -memory_info ==27018== Parent PID: 24706 ==27018== ==27018== ==27018== FILE DESCRIPTORS: 9 open (3 std) at exit. ==27018== Open file descriptor 12: ==27018== at 0xF94A07D: pipe (pipe.c:29) ==27018== by 0x1971807D: ??? ==27018== by 0x14D1D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27018== by 0x115C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27018== by 0x1155BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27018== by 0x10236D38: PetscInitialize (pinit.c:924) ==27018== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27018== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27018== by 0x13A648: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27018== by 0x13504D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27018== by 0x137DD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27018== by 0x137C74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27018== by 0x13830B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27018== by 0x133475: main (TestNumericalMethods.cpp:19) ==27018== ==27018== Open file descriptor 8: /dev/shm/open_mpi.0000 ==27018== at 0xF94EA1C: __open_nocancel (open64_nocancel.c:39) ==27018== by 0xF8D2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==27018== by 0xF19B822: ??? ==27018== by 0xF19B96F: ??? ==27018== by 0x14DC26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27018== by 0x14DC2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27018== by 0x14D78922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27018== by 0x14D1D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27018== by 0x115C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27018== by 0x1155BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27018== by 0x10236D38: PetscInitialize (pinit.c:924) ==27018== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27018== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27018== by 0x13A648: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27018== by 0x13504D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27018== by 0x137DD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27018== by 0x137C74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27018== by 0x13830B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27018== by 0x133475: main (TestNumericalMethods.cpp:19) ==27018== ==27018== Open file descriptor 145: ==27018== ==27018== ==27018== Open file descriptor 142: ==27018== ==27018== ==27018== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNumericalMethods_valgrind.txt ==27018== ==27018== ==27018== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==27018== ==27018== ==27018== ==27018== HEAP SUMMARY: ==27018== in use at exit: 618,447 bytes in 8,240 blocks ==27018== total heap usage: 69,488 allocs, 61,248 frees, 1,342,192,109 bytes allocated ==27018== ==27018== LEAK SUMMARY: ==27018== definitely lost: 0 bytes in 0 blocks ==27018== indirectly lost: 0 bytes in 0 blocks ==27018== possibly lost: 0 bytes in 0 blocks ==27018== still reachable: 56 bytes in 3 blocks ==27018== suppressed: 618,391 bytes in 8,237 blocks ==27018== Reachable blocks (those to which a pointer was found) are not shown. ==27018== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27018== ==27018== For lists of detected and suppressed errors, rerun with: -s ==27018== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)