==27154== Memcheck, a memory error detector ==27154== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==27154== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==27154== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==27154== Parent PID: 24706 ==27154== ==27154== ==27154== FILE DESCRIPTORS: 9 open (3 std) at exit. ==27154== Open file descriptor 12: ==27154== at 0xF98E07D: pipe (pipe.c:29) ==27154== by 0x1971807D: ??? ==27154== by 0x14D1D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27154== by 0x11604418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27154== by 0x1159DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27154== by 0x1027AD38: PetscInitialize (pinit.c:924) ==27154== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27154== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27154== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27154== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27154== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27154== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27154== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27154== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==27154== ==27154== Open file descriptor 8: /dev/shm/open_mpi.0000 ==27154== at 0xF992A1C: __open_nocancel (open64_nocancel.c:39) ==27154== by 0xF916BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==27154== by 0xF19B822: ??? ==27154== by 0xF19B96F: ??? ==27154== by 0x14DC26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27154== by 0x14DC2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27154== by 0x14D78922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27154== by 0x14D1D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27154== by 0x11604418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27154== by 0x1159DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27154== by 0x1027AD38: PetscInitialize (pinit.c:924) ==27154== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27154== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27154== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27154== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27154== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27154== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27154== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27154== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==27154== ==27154== Open file descriptor 145: ==27154== ==27154== ==27154== Open file descriptor 142: ==27154== ==27154== ==27154== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==27154== ==27154== ==27154== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==27154== ==27154== ==27154== ==27154== HEAP SUMMARY: ==27154== in use at exit: 618,370 bytes in 8,236 blocks ==27154== total heap usage: 12,094,025 allocs, 12,085,789 frees, 3,801,078,338 bytes allocated ==27154== ==27154== LEAK SUMMARY: ==27154== definitely lost: 0 bytes in 0 blocks ==27154== indirectly lost: 0 bytes in 0 blocks ==27154== possibly lost: 0 bytes in 0 blocks ==27154== still reachable: 56 bytes in 3 blocks ==27154== suppressed: 618,314 bytes in 8,233 blocks ==27154== Reachable blocks (those to which a pointer was found) are not shown. ==27154== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27154== ==27154== For lists of detected and suppressed errors, rerun with: -s ==27154== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)