==26269== Memcheck, a memory error detector ==26269== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26269== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26269== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticGrowingDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==26269== Parent PID: 24706 ==26269== ==26269== ==26269== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26269== Open file descriptor 12: ==26269== at 0x110B707D: pipe (pipe.c:29) ==26269== by 0x1971707D: ??? ==26269== by 0x14C824CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26269== by 0x109BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26269== by 0x10958D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26269== by 0xF62CD38: PetscInitialize (pinit.c:924) ==26269== by 0xF504079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26269== by 0xF5040C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26269== by 0x12F3BB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26269== by 0x12A2AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26269== by 0x12CDFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26269== by 0x12CC9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26269== by 0x12D333: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26269== by 0x1286D5: main (TestSimulationsWithEllipticGrowingDomainPdeModifier.cpp:19) ==26269== ==26269== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26269== at 0x110BBA1C: __open_nocancel (open64_nocancel.c:39) ==26269== by 0x1103FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26269== by 0x108B6822: ??? ==26269== by 0x108B696F: ??? ==26269== by 0x14D276DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26269== by 0x14D27938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26269== by 0x14CDD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26269== by 0x14C822DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26269== by 0x109BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26269== by 0x10958D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26269== by 0xF62CD38: PetscInitialize (pinit.c:924) ==26269== by 0xF504079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26269== by 0xF5040C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26269== by 0x12F3BB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26269== by 0x12A2AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26269== by 0x12CDFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26269== by 0x12CC9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26269== by 0x12D333: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26269== by 0x1286D5: main (TestSimulationsWithEllipticGrowingDomainPdeModifier.cpp:19) ==26269== ==26269== Open file descriptor 145: ==26269== ==26269== ==26269== Open file descriptor 142: ==26269== ==26269== ==26269== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticGrowingDomainPdeModifier_valgrind.txt ==26269== ==26269== ==26269== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26269== ==26269== ==26269== ==26269== HEAP SUMMARY: ==26269== in use at exit: 618,370 bytes in 8,236 blocks ==26269== total heap usage: 5,221,965 allocs, 5,213,729 frees, 2,325,904,672 bytes allocated ==26269== ==26269== LEAK SUMMARY: ==26269== definitely lost: 0 bytes in 0 blocks ==26269== indirectly lost: 0 bytes in 0 blocks ==26269== possibly lost: 0 bytes in 0 blocks ==26269== still reachable: 56 bytes in 3 blocks ==26269== suppressed: 618,314 bytes in 8,233 blocks ==26269== Reachable blocks (those to which a pointer was found) are not shown. ==26269== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26269== ==26269== For lists of detected and suppressed errors, rerun with: -s ==26269== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)