==25916== Memcheck, a memory error detector ==25916== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25916== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25916== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==25916== Parent PID: 23988 ==25916== ==25916== ==25916== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25916== Open file descriptor 12: ==25916== at 0xF8A507D: pipe (pipe.c:29) ==25916== by 0x1971A07D: ??? ==25916== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25916== by 0x1019F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25916== by 0x10138D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25916== by 0x102E4D38: PetscInitialize (pinit.c:924) ==25916== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25916== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25916== by 0x16556C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25916== by 0x15DBC9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25916== by 0x160D98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25916== by 0x160C38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25916== by 0x1612CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25916== by 0x15BFE5: main (TestCaBasedCellPopulation.cpp:19) ==25916== ==25916== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25916== at 0xF8A9A1C: __open_nocancel (open64_nocancel.c:39) ==25916== by 0xF82DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25916== by 0xF19B822: ??? ==25916== by 0xF19B96F: ??? ==25916== by 0x12BF76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25916== by 0x12BF7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25916== by 0x12BAD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25916== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25916== by 0x1019F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25916== by 0x10138D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25916== by 0x102E4D38: PetscInitialize (pinit.c:924) ==25916== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25916== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25916== by 0x16556C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25916== by 0x15DBC9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25916== by 0x160D98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25916== by 0x160C38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25916== by 0x1612CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25916== by 0x15BFE5: main (TestCaBasedCellPopulation.cpp:19) ==25916== ==25916== Open file descriptor 145: ==25916== ==25916== ==25916== Open file descriptor 142: ==25916== ==25916== ==25916== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==25916== ==25916== ==25916== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25916== ==25916== ==25916== ==25916== HEAP SUMMARY: ==25916== in use at exit: 618,447 bytes in 8,240 blocks ==25916== total heap usage: 75,842 allocs, 67,602 frees, 1,347,715,597 bytes allocated ==25916== ==25916== LEAK SUMMARY: ==25916== definitely lost: 0 bytes in 0 blocks ==25916== indirectly lost: 0 bytes in 0 blocks ==25916== possibly lost: 0 bytes in 0 blocks ==25916== still reachable: 56 bytes in 3 blocks ==25916== suppressed: 618,391 bytes in 8,237 blocks ==25916== Reachable blocks (those to which a pointer was found) are not shown. ==25916== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25916== ==25916== For lists of detected and suppressed errors, rerun with: -s ==25916== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)