==25925== Memcheck, a memory error detector ==25925== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25925== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25925== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==25925== Parent PID: 23988 ==25925== ==25925== ==25925== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25925== Open file descriptor 12: ==25925== at 0xF0F807D: pipe (pipe.c:29) ==25925== by 0x1971807D: ??? ==25925== by 0x13CB74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25925== by 0xED45418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25925== by 0xECDED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25925== by 0xD9D5D38: PetscInitialize (pinit.c:924) ==25925== by 0xD501079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25925== by 0xD5010C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25925== by 0x132BF5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25925== by 0x12BEE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25925== by 0x12EA38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25925== by 0x12E933: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25925== by 0x12EF47: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25925== by 0x12A6E5: main (TestCaUpdateRules.cpp:18) ==25925== ==25925== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25925== at 0xF0FCA1C: __open_nocancel (open64_nocancel.c:39) ==25925== by 0xF080BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25925== by 0xD535822: ??? ==25925== by 0xD53596F: ??? ==25925== by 0x13D5C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25925== by 0x13D5C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25925== by 0x13D12922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25925== by 0x13CB72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25925== by 0xED45418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25925== by 0xECDED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25925== by 0xD9D5D38: PetscInitialize (pinit.c:924) ==25925== by 0xD501079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25925== by 0xD5010C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25925== by 0x132BF5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25925== by 0x12BEE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25925== by 0x12EA38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25925== by 0x12E933: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25925== by 0x12EF47: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25925== by 0x12A6E5: main (TestCaUpdateRules.cpp:18) ==25925== ==25925== Open file descriptor 145: ==25925== ==25925== ==25925== Open file descriptor 142: ==25925== ==25925== ==25925== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==25925== ==25925== ==25925== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25925== ==25925== ==25925== ==25925== HEAP SUMMARY: ==25925== in use at exit: 618,447 bytes in 8,240 blocks ==25925== total heap usage: 55,731 allocs, 47,491 frees, 1,339,537,827 bytes allocated ==25925== ==25925== LEAK SUMMARY: ==25925== definitely lost: 0 bytes in 0 blocks ==25925== indirectly lost: 0 bytes in 0 blocks ==25925== possibly lost: 0 bytes in 0 blocks ==25925== still reachable: 56 bytes in 3 blocks ==25925== suppressed: 618,391 bytes in 8,237 blocks ==25925== Reachable blocks (those to which a pointer was found) are not shown. ==25925== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25925== ==25925== For lists of detected and suppressed errors, rerun with: -s ==25925== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)