==25949== Memcheck, a memory error detector ==25949== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25949== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25949== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellPopulationCountWriters -malloc_debug -malloc_dump -memory_info ==25949== Parent PID: 23988 ==25949== ==25949== ==25949== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25949== Open file descriptor 12: ==25949== at 0xF8A507D: pipe (pipe.c:29) ==25949== by 0x1971A07D: ??? ==25949== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25949== by 0x1019F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25949== by 0x10138D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25949== by 0x102E4D38: PetscInitialize (pinit.c:924) ==25949== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25949== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25949== by 0x137BD8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25949== by 0x130FA3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25949== by 0x133996: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25949== by 0x133891: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25949== by 0x133EA5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25949== by 0x12F7A5: main (TestCellPopulationCountWriters.cpp:18) ==25949== ==25949== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25949== at 0xF8A9A1C: __open_nocancel (open64_nocancel.c:39) ==25949== by 0xF82DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25949== by 0xF19B822: ??? ==25949== by 0xF19B96F: ??? ==25949== by 0x12BF76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25949== by 0x12BF7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25949== by 0x12BAD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25949== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25949== by 0x1019F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25949== by 0x10138D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25949== by 0x102E4D38: PetscInitialize (pinit.c:924) ==25949== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25949== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25949== by 0x137BD8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25949== by 0x130FA3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25949== by 0x133996: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25949== by 0x133891: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25949== by 0x133EA5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25949== by 0x12F7A5: main (TestCellPopulationCountWriters.cpp:18) ==25949== ==25949== Open file descriptor 145: ==25949== ==25949== ==25949== Open file descriptor 142: ==25949== ==25949== ==25949== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellPopulationCountWriters_valgrind.txt ==25949== ==25949== ==25949== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25949== ==25949== ==25949== ==25949== HEAP SUMMARY: ==25949== in use at exit: 618,447 bytes in 8,240 blocks ==25949== total heap usage: 57,828 allocs, 49,588 frees, 1,346,448,259 bytes allocated ==25949== ==25949== LEAK SUMMARY: ==25949== definitely lost: 0 bytes in 0 blocks ==25949== indirectly lost: 0 bytes in 0 blocks ==25949== possibly lost: 0 bytes in 0 blocks ==25949== still reachable: 56 bytes in 3 blocks ==25949== suppressed: 618,391 bytes in 8,237 blocks ==25949== Reachable blocks (those to which a pointer was found) are not shown. ==25949== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25949== ==25949== For lists of detected and suppressed errors, rerun with: -s ==25949== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)