==41329== Memcheck, a memory error detector ==41329== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41329== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41329== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCvodeCells -malloc_debug -malloc_dump -memory_info ==41329== Parent PID: 23988 ==41329== ==41329== ==41329== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41329== Open file descriptor 12: ==41329== at 0x9D1C07D: pipe (pipe.c:29) ==41329== by 0x1433007D: ??? ==41329== by 0xEE294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41329== by 0x9969418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41329== by 0x9902D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41329== by 0x8258D38: PetscInitialize (pinit.c:924) ==41329== by 0x9835079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41329== by 0x98350C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41329== by 0x1353CF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41329== by 0x12FB8B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41329== by 0x132882: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41329== by 0x132722: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41329== by 0x132DB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41329== by 0x12AB65: main (TestCvodeCells.cpp:19) ==41329== ==41329== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41329== at 0x9D20A1C: __open_nocancel (open64_nocancel.c:39) ==41329== by 0x9CA4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41329== by 0x80FD822: ??? ==41329== by 0x80FD96F: ??? ==41329== by 0xEED06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41329== by 0xEED0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41329== by 0xEE86922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41329== by 0xEE292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41329== by 0x9969418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41329== by 0x9902D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41329== by 0x8258D38: PetscInitialize (pinit.c:924) ==41329== by 0x9835079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41329== by 0x98350C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41329== by 0x1353CF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41329== by 0x12FB8B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41329== by 0x132882: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41329== by 0x132722: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41329== by 0x132DB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41329== by 0x12AB65: main (TestCvodeCells.cpp:19) ==41329== ==41329== Open file descriptor 145: ==41329== ==41329== ==41329== Open file descriptor 142: ==41329== ==41329== ==41329== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCvodeCells_valgrind.txt ==41329== ==41329== ==41329== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41329== ==41329== ==41329== ==41329== HEAP SUMMARY: ==41329== in use at exit: 620,125 bytes in 8,239 blocks ==41329== total heap usage: 231,024 allocs, 222,785 frees, 1,364,251,968 bytes allocated ==41329== ==41329== LEAK SUMMARY: ==41329== definitely lost: 0 bytes in 0 blocks ==41329== indirectly lost: 0 bytes in 0 blocks ==41329== possibly lost: 0 bytes in 0 blocks ==41329== still reachable: 1,795 bytes in 6 blocks ==41329== suppressed: 618,330 bytes in 8,233 blocks ==41329== Reachable blocks (those to which a pointer was found) are not shown. ==41329== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41329== ==41329== For lists of detected and suppressed errors, rerun with: -s ==41329== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)