==25509== Memcheck, a memory error detector ==25509== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25509== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25509== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25509== Parent PID: 23988 ==25509== ==25509== ==25509== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25509== Open file descriptor 12: ==25509== at 0x110F907D: pipe (pipe.c:29) ==25509== by 0x1971707D: ??? ==25509== by 0x14CCF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25509== by 0x10D46418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25509== by 0x10CDFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25509== by 0xF9D6D38: PetscInitialize (pinit.c:924) ==25509== by 0xF504079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25509== by 0xF5040C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25509== by 0x13CB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25509== by 0x137563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25509== by 0x13A174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25509== by 0x13A06F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25509== by 0x13A683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25509== by 0x135D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25509== ==25509== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25509== at 0x110FDA1C: __open_nocancel (open64_nocancel.c:39) ==25509== by 0x11081BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25509== by 0xF538822: ??? ==25509== by 0xF53896F: ??? ==25509== by 0x14D746DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25509== by 0x14D74938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25509== by 0x14D2A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25509== by 0x14CCF2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25509== by 0x10D46418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25509== by 0x10CDFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25509== by 0xF9D6D38: PetscInitialize (pinit.c:924) ==25509== by 0xF504079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25509== by 0xF5040C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25509== by 0x13CB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25509== by 0x137563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25509== by 0x13A174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25509== by 0x13A06F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25509== by 0x13A683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25509== by 0x135D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25509== ==25509== Open file descriptor 145: ==25509== ==25509== ==25509== Open file descriptor 142: ==25509== ==25509== ==25509== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestEllipticBoxDomainPdeModifier_valgrind.txt ==25509== ==25509== ==25509== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25509== ==25509== ==25509== ==25509== HEAP SUMMARY: ==25509== in use at exit: 618,370 bytes in 8,236 blocks ==25509== total heap usage: 5,634,857 allocs, 5,626,621 frees, 1,933,093,023 bytes allocated ==25509== ==25509== LEAK SUMMARY: ==25509== definitely lost: 0 bytes in 0 blocks ==25509== indirectly lost: 0 bytes in 0 blocks ==25509== possibly lost: 0 bytes in 0 blocks ==25509== still reachable: 56 bytes in 3 blocks ==25509== suppressed: 618,314 bytes in 8,233 blocks ==25509== Reachable blocks (those to which a pointer was found) are not shown. ==25509== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25509== ==25509== For lists of detected and suppressed errors, rerun with: -s ==25509== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)