==41259== Memcheck, a memory error detector ==41259== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41259== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41259== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedVsBidomainProblem -malloc_debug -malloc_dump -memory_info ==41259== Parent PID: 23988 ==41259== ==41259== ==41259== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41259== Open file descriptor 12: ==41259== at 0xABFA07D: pipe (pipe.c:29) ==41259== by 0x1433007D: ??? ==41259== by 0xD96B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41259== by 0xAFC8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41259== by 0xAF61D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41259== by 0xB4A3D38: PetscInitialize (pinit.c:924) ==41259== by 0xA4E2079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41259== by 0xA4E20C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41259== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41259== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41259== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41259== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41259== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41259== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==41259== ==41259== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41259== at 0xABFEA1C: __open_nocancel (open64_nocancel.c:39) ==41259== by 0xAB82BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41259== by 0xA516822: ??? ==41259== by 0xA51696F: ??? ==41259== by 0xDA106DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41259== by 0xDA10938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41259== by 0xD9C6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41259== by 0xD96B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41259== by 0xAFC8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41259== by 0xAF61D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41259== by 0xB4A3D38: PetscInitialize (pinit.c:924) ==41259== by 0xA4E2079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41259== by 0xA4E20C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41259== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41259== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41259== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41259== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41259== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41259== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==41259== ==41259== Open file descriptor 145: ==41259== ==41259== ==41259== Open file descriptor 142: ==41259== ==41259== ==41259== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedVsBidomainProblem_valgrind.txt ==41259== ==41259== ==41259== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41259== ==41259== ==41259== ==41259== HEAP SUMMARY: ==41259== in use at exit: 618,911 bytes in 8,249 blocks ==41259== total heap usage: 466,059 allocs, 457,810 frees, 1,446,515,770 bytes allocated ==41259== ==41259== LEAK SUMMARY: ==41259== definitely lost: 0 bytes in 0 blocks ==41259== indirectly lost: 0 bytes in 0 blocks ==41259== possibly lost: 0 bytes in 0 blocks ==41259== still reachable: 24 bytes in 2 blocks ==41259== suppressed: 618,887 bytes in 8,247 blocks ==41259== Reachable blocks (those to which a pointer was found) are not shown. ==41259== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41259== ==41259== For lists of detected and suppressed errors, rerun with: -s ==41259== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 64 from 38)