==43501== Memcheck, a memory error detector ==43501== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43501== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43501== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==43501== Parent PID: 23988 ==43501== ==43501== ==43501== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43501== Open file descriptor 12: ==43501== at 0xA8B607D: pipe (pipe.c:29) ==43501== by 0x1433007D: ??? ==43501== by 0xD96B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43501== by 0xAC82418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43501== by 0xAC1BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43501== by 0xB15FD38: PetscInitialize (pinit.c:924) ==43501== by 0xA19E079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43501== by 0xA19E0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43501== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43501== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43501== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43501== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43501== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43501== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==43501== ==43501== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43501== at 0xA8BAA1C: __open_nocancel (open64_nocancel.c:39) ==43501== by 0xA83EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43501== by 0xA1D2822: ??? ==43501== by 0xA1D296F: ??? ==43501== by 0xDA106DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43501== by 0xDA10938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43501== by 0xD9C6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43501== by 0xD96B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43501== by 0xAC82418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43501== by 0xAC1BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43501== by 0xB15FD38: PetscInitialize (pinit.c:924) ==43501== by 0xA19E079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43501== by 0xA19E0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43501== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43501== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43501== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43501== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43501== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43501== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==43501== ==43501== Open file descriptor 145: ==43501== ==43501== ==43501== Open file descriptor 142: ==43501== ==43501== ==43501== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==43501== ==43501== ==43501== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43501== ==43501== ==43501== ==43501== HEAP SUMMARY: ==43501== in use at exit: 618,431 bytes in 8,239 blocks ==43501== total heap usage: 120,274 allocs, 112,035 frees, 1,366,536,368 bytes allocated ==43501== ==43501== LEAK SUMMARY: ==43501== definitely lost: 0 bytes in 0 blocks ==43501== indirectly lost: 0 bytes in 0 blocks ==43501== possibly lost: 0 bytes in 0 blocks ==43501== still reachable: 24 bytes in 2 blocks ==43501== suppressed: 618,407 bytes in 8,237 blocks ==43501== Reachable blocks (those to which a pointer was found) are not shown. ==43501== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43501== ==43501== For lists of detected and suppressed errors, rerun with: -s ==43501== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)