==43861== Memcheck, a memory error detector ==43861== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43861== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43861== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHeterogeneousConductivities -malloc_debug -malloc_dump -memory_info ==43861== Parent PID: 23988 ==43861== ==43861== ==43861== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43861== Open file descriptor 12: ==43861== at 0xA7EA07D: pipe (pipe.c:29) ==43861== by 0x1433007D: ??? ==43861== by 0xD5F64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43861== by 0xABB6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43861== by 0xAB4FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43861== by 0xB093D38: PetscInitialize (pinit.c:924) ==43861== by 0xA0D2079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43861== by 0xA0D20C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43861== by 0x11BF54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43861== by 0x1174B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43861== by 0x119942: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43861== by 0x11983E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43861== by 0x119E51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43861== by 0x115CB5: main (TestHeterogeneousConductivities.cpp:18) ==43861== ==43861== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43861== at 0xA7EEA1C: __open_nocancel (open64_nocancel.c:39) ==43861== by 0xA772BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43861== by 0xA106822: ??? ==43861== by 0xA10696F: ??? ==43861== by 0xD69B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43861== by 0xD69B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43861== by 0xD651922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43861== by 0xD5F62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43861== by 0xABB6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43861== by 0xAB4FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43861== by 0xB093D38: PetscInitialize (pinit.c:924) ==43861== by 0xA0D2079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43861== by 0xA0D20C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43861== by 0x11BF54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43861== by 0x1174B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43861== by 0x119942: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43861== by 0x11983E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43861== by 0x119E51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43861== by 0x115CB5: main (TestHeterogeneousConductivities.cpp:18) ==43861== ==43861== Open file descriptor 145: ==43861== ==43861== ==43861== Open file descriptor 142: ==43861== ==43861== ==43861== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHeterogeneousConductivities_valgrind.txt ==43861== ==43861== ==43861== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43861== ==43861== ==43861== ==43861== HEAP SUMMARY: ==43861== in use at exit: 618,911 bytes in 8,249 blocks ==43861== total heap usage: 201,475 allocs, 193,226 frees, 1,372,564,577 bytes allocated ==43861== ==43861== LEAK SUMMARY: ==43861== definitely lost: 0 bytes in 0 blocks ==43861== indirectly lost: 0 bytes in 0 blocks ==43861== possibly lost: 0 bytes in 0 blocks ==43861== still reachable: 24 bytes in 2 blocks ==43861== suppressed: 618,887 bytes in 8,247 blocks ==43861== Reachable blocks (those to which a pointer was found) are not shown. ==43861== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43861== ==43861== For lists of detected and suppressed errors, rerun with: -s ==43861== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 40 from 38)