==24581== Memcheck, a memory error detector ==24581== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==24581== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==24581== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestHoneycombMeshGenerator -malloc_debug -malloc_dump -memory_info ==24581== Parent PID: 23988 ==24581== ==24581== ==24581== FILE DESCRIPTORS: 9 open (3 std) at exit. ==24581== Open file descriptor 12: ==24581== at 0x81F807D: pipe (pipe.c:29) ==24581== by 0x100CC07D: ??? ==24581== by 0xBA564CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24581== by 0x7D60418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24581== by 0x7CF9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24581== by 0x69F0D38: PetscInitialize (pinit.c:924) ==24581== by 0x655E079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24581== by 0x655E0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24581== by 0x11D935: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==24581== by 0x1187CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24581== by 0x11B508: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24581== by 0x11B3A8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24581== by 0x11BA3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24581== by 0x116BF5: main (TestHoneycombMeshGenerator.cpp:19) ==24581== ==24581== Open file descriptor 8: /dev/shm/open_mpi.0000 ==24581== at 0x81FCA1C: __open_nocancel (open64_nocancel.c:39) ==24581== by 0x8180BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==24581== by 0x6592822: ??? ==24581== by 0x659296F: ??? ==24581== by 0xBAFB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24581== by 0xBAFB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24581== by 0xBAB1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24581== by 0xBA562DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24581== by 0x7D60418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24581== by 0x7CF9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24581== by 0x69F0D38: PetscInitialize (pinit.c:924) ==24581== by 0x655E079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24581== by 0x655E0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24581== by 0x11D935: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==24581== by 0x1187CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24581== by 0x11B508: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24581== by 0x11B3A8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24581== by 0x11BA3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24581== by 0x116BF5: main (TestHoneycombMeshGenerator.cpp:19) ==24581== ==24581== Open file descriptor 145: ==24581== ==24581== ==24581== Open file descriptor 142: ==24581== ==24581== ==24581== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHoneycombMeshGenerator_valgrind.txt ==24581== ==24581== ==24581== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==24581== ==24581== ==24581== ==24581== HEAP SUMMARY: ==24581== in use at exit: 620,871 bytes in 8,240 blocks ==24581== total heap usage: 1,200,547 allocs, 1,192,307 frees, 1,379,335,946 bytes allocated ==24581== ==24581== LEAK SUMMARY: ==24581== definitely lost: 0 bytes in 0 blocks ==24581== indirectly lost: 0 bytes in 0 blocks ==24581== possibly lost: 0 bytes in 0 blocks ==24581== still reachable: 2,576 bytes in 3 blocks ==24581== suppressed: 618,295 bytes in 8,237 blocks ==24581== Reachable blocks (those to which a pointer was found) are not shown. ==24581== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==24581== ==24581== For lists of detected and suppressed errors, rerun with: -s ==24581== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)