==34596== Memcheck, a memory error detector ==34596== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==34596== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==34596== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==34596== Parent PID: 23988 ==34596== ==34596== ==34596== FILE DESCRIPTORS: 9 open (3 std) at exit. ==34596== Open file descriptor 12: ==34596== at 0xF98E07D: pipe (pipe.c:29) ==34596== by 0x1971A07D: ??? ==34596== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==34596== by 0x10286418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34596== by 0x1021FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34596== by 0x103CBD38: PetscInitialize (pinit.c:924) ==34596== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==34596== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==34596== by 0x1D7654: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==34596== by 0x1CF139: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==34596== by 0x1D29B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==34596== by 0x1D2858: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==34596== by 0x1D2EEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==34596== by 0x1CD555: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==34596== ==34596== Open file descriptor 8: /dev/shm/open_mpi.0000 ==34596== at 0xF992A1C: __open_nocancel (open64_nocancel.c:39) ==34596== by 0xF916BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==34596== by 0xF19B822: ??? ==34596== by 0xF19B96F: ??? ==34596== by 0x12BF76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==34596== by 0x12BF7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==34596== by 0x12BAD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==34596== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==34596== by 0x10286418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34596== by 0x1021FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34596== by 0x103CBD38: PetscInitialize (pinit.c:924) ==34596== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==34596== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==34596== by 0x1D7654: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==34596== by 0x1CF139: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==34596== by 0x1D29B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==34596== by 0x1D2858: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==34596== by 0x1D2EEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==34596== by 0x1CD555: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==34596== ==34596== Open file descriptor 145: ==34596== ==34596== ==34596== Open file descriptor 142: ==34596== ==34596== ==34596== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==34596== ==34596== ==34596== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==34596== ==34596== ==34596== ==34596== HEAP SUMMARY: ==34596== in use at exit: 618,386 bytes in 8,237 blocks ==34596== total heap usage: 11,682,533 allocs, 11,674,296 frees, 2,208,526,113 bytes allocated ==34596== ==34596== LEAK SUMMARY: ==34596== definitely lost: 0 bytes in 0 blocks ==34596== indirectly lost: 0 bytes in 0 blocks ==34596== possibly lost: 0 bytes in 0 blocks ==34596== still reachable: 72 bytes in 4 blocks ==34596== suppressed: 618,314 bytes in 8,233 blocks ==34596== Reachable blocks (those to which a pointer was found) are not shown. ==34596== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==34596== ==34596== For lists of detected and suppressed errors, rerun with: -s ==34596== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)