==25805== Memcheck, a memory error detector ==25805== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25805== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25805== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsElement -malloc_debug -malloc_dump -memory_info ==25805== Parent PID: 23988 ==25805== ==25805== ==25805== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25805== Open file descriptor 12: ==25805== at 0xF51E07D: pipe (pipe.c:29) ==25805== by 0x1971A07D: ??? ==25805== by 0x12B034CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25805== by 0xFE16418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25805== by 0xFDAFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25805== by 0xFF9FD38: PetscInitialize (pinit.c:924) ==25805== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25805== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25805== by 0x11A5B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25805== by 0x115A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25805== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25805== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25805== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25805== by 0x113E95: main (TestPottsElement.cpp:19) ==25805== ==25805== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25805== at 0xF522A1C: __open_nocancel (open64_nocancel.c:39) ==25805== by 0xF4A6BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25805== by 0xF19B822: ??? ==25805== by 0xF19B96F: ??? ==25805== by 0x12BA86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25805== by 0x12BA8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25805== by 0x12B5E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25805== by 0x12B032DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25805== by 0xFE16418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25805== by 0xFDAFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25805== by 0xFF9FD38: PetscInitialize (pinit.c:924) ==25805== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25805== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25805== by 0x11A5B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25805== by 0x115A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25805== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25805== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25805== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25805== by 0x113E95: main (TestPottsElement.cpp:19) ==25805== ==25805== Open file descriptor 145: ==25805== ==25805== ==25805== Open file descriptor 142: ==25805== ==25805== ==25805== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsElement_valgrind.txt ==25805== ==25805== ==25805== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25805== ==25805== ==25805== ==25805== HEAP SUMMARY: ==25805== in use at exit: 618,415 bytes in 8,239 blocks ==25805== total heap usage: 53,106 allocs, 44,867 frees, 1,339,234,241 bytes allocated ==25805== ==25805== LEAK SUMMARY: ==25805== definitely lost: 0 bytes in 0 blocks ==25805== indirectly lost: 0 bytes in 0 blocks ==25805== possibly lost: 0 bytes in 0 blocks ==25805== still reachable: 24 bytes in 2 blocks ==25805== suppressed: 618,391 bytes in 8,237 blocks ==25805== Reachable blocks (those to which a pointer was found) are not shown. ==25805== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25805== ==25805== For lists of detected and suppressed errors, rerun with: -s ==25805== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)