==25625== Memcheck, a memory error detector ==25625== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25625== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25625== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25625== Parent PID: 23988 ==25625== ==25625== ==25625== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25625== Open file descriptor 12: ==25625== at 0x110B707D: pipe (pipe.c:29) ==25625== by 0x1971707D: ??? ==25625== by 0x14CCF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25625== by 0x10D04418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25625== by 0x10C9DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25625== by 0xF994D38: PetscInitialize (pinit.c:924) ==25625== by 0xF504079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25625== by 0xF5040C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25625== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25625== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25625== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25625== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25625== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25625== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==25625== ==25625== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25625== at 0x110BBA1C: __open_nocancel (open64_nocancel.c:39) ==25625== by 0x1103FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25625== by 0xF538822: ??? ==25625== by 0xF53896F: ??? ==25625== by 0x14D746DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25625== by 0x14D74938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25625== by 0x14D2A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25625== by 0x14CCF2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25625== by 0x10D04418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25625== by 0x10C9DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25625== by 0xF994D38: PetscInitialize (pinit.c:924) ==25625== by 0xF504079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25625== by 0xF5040C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25625== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25625== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25625== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25625== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25625== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25625== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==25625== ==25625== Open file descriptor 145: ==25625== ==25625== ==25625== Open file descriptor 142: ==25625== ==25625== ==25625== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==25625== ==25625== ==25625== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25625== ==25625== ==25625== ==25625== HEAP SUMMARY: ==25625== in use at exit: 618,370 bytes in 8,236 blocks ==25625== total heap usage: 7,866,177 allocs, 7,857,941 frees, 2,189,205,385 bytes allocated ==25625== ==25625== LEAK SUMMARY: ==25625== definitely lost: 0 bytes in 0 blocks ==25625== indirectly lost: 0 bytes in 0 blocks ==25625== possibly lost: 0 bytes in 0 blocks ==25625== still reachable: 56 bytes in 3 blocks ==25625== suppressed: 618,314 bytes in 8,233 blocks ==25625== Reachable blocks (those to which a pointer was found) are not shown. ==25625== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25625== ==25625== For lists of detected and suppressed errors, rerun with: -s ==25625== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)