==39262== Memcheck, a memory error detector ==39262== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39262== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39262== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestStepSizeException -malloc_debug -malloc_dump -memory_info ==39262== Parent PID: 23988 ==39262== ==39262== ==39262== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39262== Open file descriptor 12: ==39262== at 0x4CB307D: pipe (pipe.c:29) ==39262== by 0xAEA507D: ??? ==39262== by 0x643B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39262== by 0x4EAE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39262== by 0x4E47D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39262== by 0x5035D38: PetscInitialize (pinit.c:924) ==39262== by 0x48FA079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39262== by 0x48FA0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39262== by 0x113D54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39262== by 0x10F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39262== by 0x111C9E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39262== by 0x111B3E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39262== by 0x1121D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39262== by 0x10D735: main (TestStepSizeException.cpp:19) ==39262== ==39262== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39262== at 0x4CB7A1C: __open_nocancel (open64_nocancel.c:39) ==39262== by 0x4C3BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39262== by 0x492E822: ??? ==39262== by 0x492E96F: ??? ==39262== by 0x64E06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39262== by 0x64E0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39262== by 0x6496922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39262== by 0x643B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39262== by 0x4EAE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39262== by 0x4E47D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39262== by 0x5035D38: PetscInitialize (pinit.c:924) ==39262== by 0x48FA079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39262== by 0x48FA0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39262== by 0x113D54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39262== by 0x10F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39262== by 0x111C9E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39262== by 0x111B3E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39262== by 0x1121D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39262== by 0x10D735: main (TestStepSizeException.cpp:19) ==39262== ==39262== Open file descriptor 145: ==39262== ==39262== ==39262== Open file descriptor 142: ==39262== ==39262== ==39262== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestStepSizeException_valgrind.txt ==39262== ==39262== ==39262== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39262== ==39262== ==39262== ==39262== HEAP SUMMARY: ==39262== in use at exit: 617,951 bytes in 8,239 blocks ==39262== total heap usage: 44,917 allocs, 36,678 frees, 1,338,497,564 bytes allocated ==39262== ==39262== LEAK SUMMARY: ==39262== definitely lost: 0 bytes in 0 blocks ==39262== indirectly lost: 0 bytes in 0 blocks ==39262== possibly lost: 0 bytes in 0 blocks ==39262== still reachable: 24 bytes in 2 blocks ==39262== suppressed: 617,927 bytes in 8,237 blocks ==39262== Reachable blocks (those to which a pointer was found) are not shown. ==39262== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39262== ==39262== For lists of detected and suppressed errors, rerun with: -s ==39262== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)