==25504== Memcheck, a memory error detector ==25504== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25504== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25504== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedParabolicPdes -malloc_debug -malloc_dump -memory_info ==25504== Parent PID: 23988 ==25504== ==25504== ==25504== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25504== Open file descriptor 12: ==25504== at 0x10E4307D: pipe (pipe.c:29) ==25504== by 0x1971807D: ??? ==25504== by 0x14C7D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25504== by 0x10622418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25504== by 0x105BBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25504== by 0xF28FD38: PetscInitialize (pinit.c:924) ==25504== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25504== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25504== by 0x12D4E3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25504== by 0x12825D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25504== by 0x12ADE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25504== by 0x12AC80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25504== by 0x12B317: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25504== by 0x126685: main (TestCellBasedParabolicPdes.cpp:19) ==25504== ==25504== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25504== at 0x10E47A1C: __open_nocancel (open64_nocancel.c:39) ==25504== by 0x10DCBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25504== by 0x1051F822: ??? ==25504== by 0x1051F96F: ??? ==25504== by 0x14D246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25504== by 0x14D24938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25504== by 0x14CDA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25504== by 0x14C7D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25504== by 0x10622418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25504== by 0x105BBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25504== by 0xF28FD38: PetscInitialize (pinit.c:924) ==25504== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25504== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25504== by 0x12D4E3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25504== by 0x12825D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25504== by 0x12ADE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25504== by 0x12AC80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25504== by 0x12B317: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25504== by 0x126685: main (TestCellBasedParabolicPdes.cpp:19) ==25504== ==25504== Open file descriptor 145: ==25504== ==25504== ==25504== Open file descriptor 142: ==25504== ==25504== ==25504== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedParabolicPdes_valgrind.txt ==25504== ==25504== ==25504== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25504== ==25504== ==25504== ==25504== HEAP SUMMARY: ==25504== in use at exit: 618,447 bytes in 8,240 blocks ==25504== total heap usage: 74,071 allocs, 65,831 frees, 1,343,019,505 bytes allocated ==25504== ==25504== LEAK SUMMARY: ==25504== definitely lost: 0 bytes in 0 blocks ==25504== indirectly lost: 0 bytes in 0 blocks ==25504== possibly lost: 0 bytes in 0 blocks ==25504== still reachable: 56 bytes in 3 blocks ==25504== suppressed: 618,391 bytes in 8,237 blocks ==25504== Reachable blocks (those to which a pointer was found) are not shown. ==25504== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25504== ==25504== For lists of detected and suppressed errors, rerun with: -s ==25504== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)