==40390== Memcheck, a memory error detector ==40390== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40390== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40390== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCellBetaCateninWriter -malloc_debug -malloc_dump -memory_info ==40390== Parent PID: 23988 ==40390== ==40390== ==40390== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40390== Open file descriptor 12: ==40390== at 0x1116707D: pipe (pipe.c:29) ==40390== by 0x1B3DA07D: ??? ==40390== by 0x165DC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40390== by 0x12EAA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40390== by 0x12E43D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40390== by 0x11B3AD38: PetscInitialize (pinit.c:924) ==40390== by 0x10A8C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40390== by 0x10A8C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40390== by 0x136F12: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40390== by 0x130103: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40390== by 0x132B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40390== by 0x132A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40390== by 0x133065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40390== by 0x12E905: main (TestCellBetaCateninWriter.cpp:18) ==40390== ==40390== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40390== at 0x1116BA1C: __open_nocancel (open64_nocancel.c:39) ==40390== by 0x110EFBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40390== by 0x6122822: ??? ==40390== by 0x612296F: ??? ==40390== by 0x166816DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40390== by 0x16681938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40390== by 0x16637922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40390== by 0x165DC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40390== by 0x12EAA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40390== by 0x12E43D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40390== by 0x11B3AD38: PetscInitialize (pinit.c:924) ==40390== by 0x10A8C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40390== by 0x10A8C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40390== by 0x136F12: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40390== by 0x130103: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40390== by 0x132B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40390== by 0x132A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40390== by 0x133065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40390== by 0x12E905: main (TestCellBetaCateninWriter.cpp:18) ==40390== ==40390== Open file descriptor 145: ==40390== ==40390== ==40390== Open file descriptor 142: ==40390== ==40390== ==40390== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBetaCateninWriter_valgrind.txt ==40390== ==40390== ==40390== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40390== ==40390== ==40390== ==40390== HEAP SUMMARY: ==40390== in use at exit: 618,543 bytes in 8,241 blocks ==40390== total heap usage: 63,446 allocs, 55,205 frees, 1,341,432,661 bytes allocated ==40390== ==40390== LEAK SUMMARY: ==40390== definitely lost: 0 bytes in 0 blocks ==40390== indirectly lost: 0 bytes in 0 blocks ==40390== possibly lost: 0 bytes in 0 blocks ==40390== still reachable: 136 bytes in 4 blocks ==40390== suppressed: 618,407 bytes in 8,237 blocks ==40390== Reachable blocks (those to which a pointer was found) are not shown. ==40390== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40390== ==40390== For lists of detected and suppressed errors, rerun with: -s ==40390== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)