==25915== Memcheck, a memory error detector ==25915== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25915== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25915== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellPopulationBoundaryConditions -malloc_debug -malloc_dump -memory_info ==25915== Parent PID: 23988 ==25915== ==25915== ==25915== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25915== Open file descriptor 12: ==25915== at 0xF98E07D: pipe (pipe.c:29) ==25915== by 0x1971807D: ??? ==25915== by 0x14D1D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25915== by 0x115EA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25915== by 0x11583D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25915== by 0x1027AD38: PetscInitialize (pinit.c:924) ==25915== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25915== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25915== by 0x1550EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25915== by 0x14DBDD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25915== by 0x150A32: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25915== by 0x1508D2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25915== by 0x150F69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25915== by 0x14C005: main (TestCellPopulationBoundaryConditions.cpp:19) ==25915== ==25915== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25915== at 0xF992A1C: __open_nocancel (open64_nocancel.c:39) ==25915== by 0xF916BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25915== by 0xF1A1822: ??? ==25915== by 0xF1A196F: ??? ==25915== by 0x14DC26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25915== by 0x14DC2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25915== by 0x14D78922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25915== by 0x14D1D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25915== by 0x115EA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25915== by 0x11583D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25915== by 0x1027AD38: PetscInitialize (pinit.c:924) ==25915== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25915== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25915== by 0x1550EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25915== by 0x14DBDD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25915== by 0x150A32: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25915== by 0x1508D2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25915== by 0x150F69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25915== by 0x14C005: main (TestCellPopulationBoundaryConditions.cpp:19) ==25915== ==25915== Open file descriptor 145: ==25915== ==25915== ==25915== Open file descriptor 142: ==25915== ==25915== ==25915== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellPopulationBoundaryConditions_valgrind.txt ==25915== ==25915== ==25915== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25915== ==25915== ==25915== ==25915== HEAP SUMMARY: ==25915== in use at exit: 618,447 bytes in 8,240 blocks ==25915== total heap usage: 70,307 allocs, 62,067 frees, 1,342,800,798 bytes allocated ==25915== ==25915== LEAK SUMMARY: ==25915== definitely lost: 0 bytes in 0 blocks ==25915== indirectly lost: 0 bytes in 0 blocks ==25915== possibly lost: 0 bytes in 0 blocks ==25915== still reachable: 56 bytes in 3 blocks ==25915== suppressed: 618,391 bytes in 8,237 blocks ==25915== Reachable blocks (those to which a pointer was found) are not shown. ==25915== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25915== ==25915== For lists of detected and suppressed errors, rerun with: -s ==25915== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)