==38942== Memcheck, a memory error detector ==38942== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==38942== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==38942== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimpleTargetAreaModifier -malloc_debug -malloc_dump -memory_info ==38942== Parent PID: 23988 ==38942== ==38942== ==38942== FILE DESCRIPTORS: 9 open (3 std) at exit. ==38942== Open file descriptor 12: ==38942== at 0x10D5C07D: pipe (pipe.c:29) ==38942== by 0x1971807D: ??? ==38942== by 0x14C7D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==38942== by 0x10622418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==38942== by 0x105BBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==38942== by 0xF28FD38: PetscInitialize (pinit.c:924) ==38942== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==38942== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==38942== by 0x139D63: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==38942== by 0x1324DD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==38942== by 0x1357DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==38942== by 0x13567C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==38942== by 0x135D13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==38942== by 0x130905: main (TestSimpleTargetAreaModifier.cpp:19) ==38942== ==38942== Open file descriptor 8: /dev/shm/open_mpi.0000 ==38942== at 0x10D60A1C: __open_nocancel (open64_nocancel.c:39) ==38942== by 0x10CE4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==38942== by 0x1051F822: ??? ==38942== by 0x1051F96F: ??? ==38942== by 0x14D246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==38942== by 0x14D24938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==38942== by 0x14CDA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==38942== by 0x14C7D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==38942== by 0x10622418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==38942== by 0x105BBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==38942== by 0xF28FD38: PetscInitialize (pinit.c:924) ==38942== by 0xF167079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==38942== by 0xF1670C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==38942== by 0x139D63: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==38942== by 0x1324DD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==38942== by 0x1357DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==38942== by 0x13567C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==38942== by 0x135D13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==38942== by 0x130905: main (TestSimpleTargetAreaModifier.cpp:19) ==38942== ==38942== Open file descriptor 145: ==38942== ==38942== ==38942== Open file descriptor 142: ==38942== ==38942== ==38942== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleTargetAreaModifier_valgrind.txt ==38942== ==38942== ==38942== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==38942== ==38942== ==38942== ==38942== HEAP SUMMARY: ==38942== in use at exit: 618,447 bytes in 8,240 blocks ==38942== total heap usage: 588,699 allocs, 580,459 frees, 1,437,473,325 bytes allocated ==38942== ==38942== LEAK SUMMARY: ==38942== definitely lost: 0 bytes in 0 blocks ==38942== indirectly lost: 0 bytes in 0 blocks ==38942== possibly lost: 0 bytes in 0 blocks ==38942== still reachable: 56 bytes in 3 blocks ==38942== suppressed: 618,391 bytes in 8,237 blocks ==38942== Reachable blocks (those to which a pointer was found) are not shown. ==38942== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==38942== ==38942== For lists of detected and suppressed errors, rerun with: -s ==38942== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)