==40894== Memcheck, a memory error detector ==40894== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40894== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40894== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestAirwayRemesher -malloc_debug -malloc_dump -memory_info ==40894== Parent PID: 23963 ==40894== ==40894== ==40894== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40894== Open file descriptor 12: ==40894== at 0x823107D: pipe (pipe.c:29) ==40894== by 0x107AB07D: ??? ==40894== by 0xBFDD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40894== by 0x7B39418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40894== by 0x7AD2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40894== by 0x67A6D38: PetscInitialize (pinit.c:924) ==40894== by 0x667E079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40894== by 0x667E0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40894== by 0x11A567: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40894== by 0x116153: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40894== by 0x1185EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40894== by 0x1184E7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40894== by 0x118AFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40894== by 0x114955: main (TestAirwayRemesher.cpp:18) ==40894== ==40894== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40894== at 0x8235A1C: __open_nocancel (open64_nocancel.c:39) ==40894== by 0x81B9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40894== by 0x7A36822: ??? ==40894== by 0x7A3696F: ??? ==40894== by 0xC0826DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40894== by 0xC082938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40894== by 0xC038922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40894== by 0xBFDD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40894== by 0x7B39418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40894== by 0x7AD2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40894== by 0x67A6D38: PetscInitialize (pinit.c:924) ==40894== by 0x667E079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40894== by 0x667E0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40894== by 0x11A567: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40894== by 0x116153: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40894== by 0x1185EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40894== by 0x1184E7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40894== by 0x118AFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40894== by 0x114955: main (TestAirwayRemesher.cpp:18) ==40894== ==40894== Open file descriptor 145: ==40894== ==40894== ==40894== Open file descriptor 142: ==40894== ==40894== ==40894== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAirwayRemesher_valgrind.txt ==40894== ==40894== ==40894== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40894== ==40894== ==40894== ==40894== HEAP SUMMARY: ==40894== in use at exit: 618,338 bytes in 8,235 blocks ==40894== total heap usage: 11,597,070 allocs, 11,588,835 frees, 1,797,861,941 bytes allocated ==40894== ==40894== LEAK SUMMARY: ==40894== definitely lost: 0 bytes in 0 blocks ==40894== indirectly lost: 0 bytes in 0 blocks ==40894== possibly lost: 0 bytes in 0 blocks ==40894== still reachable: 24 bytes in 2 blocks ==40894== suppressed: 618,314 bytes in 8,233 blocks ==40894== Reachable blocks (those to which a pointer was found) are not shown. ==40894== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40894== ==40894== For lists of detected and suppressed errors, rerun with: -s ==40894== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)