==40291== Memcheck, a memory error detector ==40291== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40291== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40291== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCellBetaCateninWriter -malloc_debug -malloc_dump -memory_info ==40291== Parent PID: 23963 ==40291== ==40291== ==40291== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40291== Open file descriptor 12: ==40291== at 0x1116707D: pipe (pipe.c:29) ==40291== by 0x1B3DA07D: ??? ==40291== by 0x165DC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40291== by 0x12EAA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40291== by 0x12E43D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40291== by 0x11B3AD38: PetscInitialize (pinit.c:924) ==40291== by 0x10A8C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40291== by 0x10A8C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40291== by 0x136F12: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40291== by 0x130103: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40291== by 0x132B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40291== by 0x132A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40291== by 0x133065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40291== by 0x12E905: main (TestCellBetaCateninWriter.cpp:18) ==40291== ==40291== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40291== at 0x1116BA1C: __open_nocancel (open64_nocancel.c:39) ==40291== by 0x110EFBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40291== by 0x6122822: ??? ==40291== by 0x612296F: ??? ==40291== by 0x166816DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40291== by 0x16681938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40291== by 0x16637922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40291== by 0x165DC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40291== by 0x12EAA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40291== by 0x12E43D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40291== by 0x11B3AD38: PetscInitialize (pinit.c:924) ==40291== by 0x10A8C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40291== by 0x10A8C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40291== by 0x136F12: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40291== by 0x130103: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40291== by 0x132B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40291== by 0x132A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40291== by 0x133065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40291== by 0x12E905: main (TestCellBetaCateninWriter.cpp:18) ==40291== ==40291== Open file descriptor 145: ==40291== ==40291== ==40291== Open file descriptor 142: ==40291== ==40291== ==40291== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBetaCateninWriter_valgrind.txt ==40291== ==40291== ==40291== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40291== ==40291== ==40291== ==40291== HEAP SUMMARY: ==40291== in use at exit: 618,543 bytes in 8,241 blocks ==40291== total heap usage: 63,446 allocs, 55,205 frees, 1,341,432,377 bytes allocated ==40291== ==40291== LEAK SUMMARY: ==40291== definitely lost: 0 bytes in 0 blocks ==40291== indirectly lost: 0 bytes in 0 blocks ==40291== possibly lost: 0 bytes in 0 blocks ==40291== still reachable: 136 bytes in 4 blocks ==40291== suppressed: 618,407 bytes in 8,237 blocks ==40291== Reachable blocks (those to which a pointer was found) are not shown. ==40291== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40291== ==40291== For lists of detected and suppressed errors, rerun with: -s ==40291== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)