==23967== Memcheck, a memory error detector ==23967== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==23967== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==23967== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==23967== Parent PID: 23963 ==23967== ==23967== ==23967== FILE DESCRIPTORS: 9 open (3 std) at exit. ==23967== Open file descriptor 12: ==23967== at 0x4CB107D: pipe (pipe.c:29) ==23967== by 0xAEA507D: ??? ==23967== by 0x89BB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==23967== by 0x622C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==23967== by 0x61C5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==23967== by 0x4EBCD38: PetscInitialize (pinit.c:924) ==23967== by 0x48FA079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==23967== by 0x48FA0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==23967== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==23967== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==23967== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==23967== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==23967== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==23967== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==23967== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==23967== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==23967== by 0x110C15: main (TestCitations.cpp:18) ==23967== ==23967== Open file descriptor 8: /dev/shm/open_mpi.0000 ==23967== at 0x4CB5A1C: __open_nocancel (open64_nocancel.c:39) ==23967== by 0x4C39BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==23967== by 0x4934822: ??? ==23967== by 0x493496F: ??? ==23967== by 0x8A606DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==23967== by 0x8A60938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==23967== by 0x8A16922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==23967== by 0x89BB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==23967== by 0x622C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==23967== by 0x61C5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==23967== by 0x4EBCD38: PetscInitialize (pinit.c:924) ==23967== by 0x48FA079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==23967== by 0x48FA0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==23967== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==23967== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==23967== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==23967== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==23967== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==23967== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==23967== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==23967== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==23967== by 0x110C15: main (TestCitations.cpp:18) ==23967== ==23967== Open file descriptor 145: ==23967== ==23967== ==23967== Open file descriptor 142: ==23967== ==23967== ==23967== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==23967== ==23967== ==23967== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==23967== ==23967== ==23967== ==23967== HEAP SUMMARY: ==23967== in use at exit: 617,951 bytes in 8,239 blocks ==23967== total heap usage: 45,217 allocs, 36,978 frees, 1,338,667,026 bytes allocated ==23967== ==23967== LEAK SUMMARY: ==23967== definitely lost: 0 bytes in 0 blocks ==23967== indirectly lost: 0 bytes in 0 blocks ==23967== possibly lost: 0 bytes in 0 blocks ==23967== still reachable: 24 bytes in 2 blocks ==23967== suppressed: 617,927 bytes in 8,237 blocks ==23967== Reachable blocks (those to which a pointer was found) are not shown. ==23967== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==23967== ==23967== For lists of detected and suppressed errors, rerun with: -s ==23967== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)