==41067== Memcheck, a memory error detector ==41067== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41067== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41067== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainDistributedMesh -malloc_debug -malloc_dump -memory_info ==41067== Parent PID: 23965 ==41067== ==41067== ==41067== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41067== Open file descriptor 12: ==41067== at 0xBC2207D: pipe (pipe.c:29) ==41067== by 0x1434307D: ??? ==41067== by 0xFAFE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41067== by 0xB510418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41067== by 0xB4A9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41067== by 0xA17DD38: PetscInitialize (pinit.c:924) ==41067== by 0xA051E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41067== by 0xA051EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41067== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41067== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41067== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41067== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41067== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41067== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==41067== ==41067== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41067== at 0xBC26A1C: __open_nocancel (open64_nocancel.c:39) ==41067== by 0xBBAABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41067== by 0xB40D822: ??? ==41067== by 0xB40D96F: ??? ==41067== by 0xFBA36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41067== by 0xFBA3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41067== by 0xFB59922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41067== by 0xFAFE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41067== by 0xB510418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41067== by 0xB4A9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41067== by 0xA17DD38: PetscInitialize (pinit.c:924) ==41067== by 0xA051E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41067== by 0xA051EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41067== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41067== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41067== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41067== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41067== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41067== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==41067== ==41067== Open file descriptor 145: ==41067== ==41067== ==41067== Open file descriptor 142: ==41067== ==41067== ==41067== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainDistributedMesh_valgrind.txt ==41067== ==41067== ==41067== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41067== ==41067== ==41067== ==41067== HEAP SUMMARY: ==41067== in use at exit: 618,911 bytes in 8,249 blocks ==41067== total heap usage: 428,255 allocs, 420,006 frees, 1,437,732,194 bytes allocated ==41067== ==41067== LEAK SUMMARY: ==41067== definitely lost: 0 bytes in 0 blocks ==41067== indirectly lost: 0 bytes in 0 blocks ==41067== possibly lost: 0 bytes in 0 blocks ==41067== still reachable: 24 bytes in 2 blocks ==41067== suppressed: 618,887 bytes in 8,247 blocks ==41067== Reachable blocks (those to which a pointer was found) are not shown. ==41067== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41067== ==41067== For lists of detected and suppressed errors, rerun with: -s ==41067== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 55 from 38)