==25862== Memcheck, a memory error detector ==25862== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25862== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25862== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==25862== Parent PID: 23965 ==25862== ==25862== ==25862== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25862== Open file descriptor 12: ==25862== at 0xF10A07D: pipe (pipe.c:29) ==25862== by 0x1972A07D: ??? ==25862== by 0x13C7C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25862== by 0xE9D0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25862== by 0xE969D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25862== by 0xD63DD38: PetscInitialize (pinit.c:924) ==25862== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25862== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25862== by 0x132BF5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25862== by 0x12BEE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25862== by 0x12EA38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25862== by 0x12E933: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25862== by 0x12EF47: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25862== by 0x12A6E5: main (TestCaUpdateRules.cpp:18) ==25862== ==25862== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25862== at 0xF10EA1C: __open_nocancel (open64_nocancel.c:39) ==25862== by 0xF092BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25862== by 0xE8CD822: ??? ==25862== by 0xE8CD96F: ??? ==25862== by 0x13D216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25862== by 0x13D21938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25862== by 0x13CD7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25862== by 0x13C7C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25862== by 0xE9D0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25862== by 0xE969D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25862== by 0xD63DD38: PetscInitialize (pinit.c:924) ==25862== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25862== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25862== by 0x132BF5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25862== by 0x12BEE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25862== by 0x12EA38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25862== by 0x12E933: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25862== by 0x12EF47: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25862== by 0x12A6E5: main (TestCaUpdateRules.cpp:18) ==25862== ==25862== Open file descriptor 145: ==25862== ==25862== ==25862== Open file descriptor 142: ==25862== ==25862== ==25862== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==25862== ==25862== ==25862== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25862== ==25862== ==25862== ==25862== HEAP SUMMARY: ==25862== in use at exit: 618,447 bytes in 8,240 blocks ==25862== total heap usage: 55,730 allocs, 47,490 frees, 1,339,537,525 bytes allocated ==25862== ==25862== LEAK SUMMARY: ==25862== definitely lost: 0 bytes in 0 blocks ==25862== indirectly lost: 0 bytes in 0 blocks ==25862== possibly lost: 0 bytes in 0 blocks ==25862== still reachable: 56 bytes in 3 blocks ==25862== suppressed: 618,391 bytes in 8,237 blocks ==25862== Reachable blocks (those to which a pointer was found) are not shown. ==25862== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25862== ==25862== For lists of detected and suppressed errors, rerun with: -s ==25862== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)